Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Psmb3
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name proteasome (prosome, macropain) subunit, beta type 3
Also known as C10-II
Coordinate chr11:97594260-97604326
Strand +
Gene summary Predicted to enable endopeptidase activity. Predicted to be involved in proteasomal protein catabolic process. Predicted to act upstream of or within protein catabolic process. Part of proteasome core complex. Is expressed in several structures, including alimentary system; cranial ganglion; gonad; maturing glomerular tuft; and orbito-sphenoid. Orthologous to human PSMB3 (proteasome 20S subunit beta 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psmb3

Retroname Coord Strand Genomic Region ENSG
Psmb3P4 chr10:23921458-23922164 + Intergenic
ENSMUSG00000082960 UCSC
Psmb3P6 chr17:17720600-17721218 + Intergenic
ENSMUSG00000116532 UCSC
Psmb3P7 chr18:51998324-51998984 - Intergenic
ENSMUSG00000069379 UCSC
Psmb3P8 chr18:72559530-72560209 - Intergenic
ENSMUSG00000117831 UCSC
Psmb3P2 chr2:77165648-77166253 + Intergenic
ENSMUSG00000082006 UCSC
Psmb3P1 chr2:155040540-155041209 - Intragenic
ENSMUSG00000082596 UCSC
Psmb3P3 chr8:89913559-89914217 - Intergenic
ENSMUSG00000069962 UCSC
Psmb3P5 chr16:21715201-21715925 + Intragenic
ENSMUSG00000117327 UCSC

Expression

Transcript Sequences

>NM_011971.4
AGAGCCGGTTTGCAGGCAACGCTGTGGGGATCGGGCTTCCACTCCAGCGCAATCATGTCTATTATGTCCTATAATGGAGGGGCCGTCATGGCCATGAAGGGAAAGAACTGTGTGGCCATCGCTGCAGACAGACGTTTCGGGATCCAGGCCCAGATGGTGACCACGGACTTCCAGAAGATCTTTCCCATGGGTGACAGGCTCTACATAGGCCTGGCCGGCCTGGCCACTGACGTCCAGACAGTTGCCCAGCGTCTCAAGTTCCGACTGAACTTGTATGAGCTGAAAGAAGGTCGACAGATCAAGCCTTACACCCTCATGAGCATGGTGGCCAACCTCCTGTATGAGAAGCGGTTCGGTCCCTACTACACAGAGCCTGTCATTGCTGGCCTGGACCCGAAGACCTTCAAGCCCTTCATTTGCTCTCTGGACCTCATTGGCTGTCCCATGGTGACTGATGACTTTGTAGTCAGTGGTACCTGCTCCGAACAAATGTATGGGATGTGTGAGTCTCTCTGGGAGCCCAACATGGATCCAGAACACCTGTTTGAAACCATTTCTCAGGCCATGCTGAACGCGGTGGACCGGGATGCCGTGTCGGGCATGGGCGTCATCGTCCACGTCATTGAGAAAGACAAGATCACCACCAGGACGCTGAAGGCCCGGATGGACTAACCTGTGCTCTGGTCCCATctcccttttgtttttctttttaataaaattgcCTTTCtttc