Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl27a
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L27A
Also known as L27'|L27A|L29
Coordinate chr7:109118402-109121576
Strand +
Gene summary A structural constituent of ribosome. Acts upstream of or within translation. Located in cytosolic ribosome. Is expressed in endolymphatic appendage and head. Orthologous to human RPL27A (ribosomal protein L27a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl27a

Retroname Coord Strand Genomic Region ENSG
Rpl27aP1 chr1:127210361-127210867 - Intragenic
ENSMUSG00000099471 UCSC
Rpl27aP19 chr10:18178372-18178810 - Intergenic
ENSMUSG00000110762 UCSC
Rpl27aP20 chr10:61145584-61146098 + Intergenic
ENSMUSG00000061488 UCSC
Rpl27aP21 chr11:53793506-53794009 - Intergenic
ENSMUSG00000082380 UCSC
Rpl27aP22 chr13:24504268-24504732 + Intergenic
ENSMUSG00000081909 UCSC
Rpl27aP23 chr13:26971371-26971657 - Intergenic
ENSMUSG00000081653 UCSC
Rpl27aP24 chr13:99040708-99041215 + Intergenic
ENSMUSG00000062461 UCSC
Rpl27aP25 chr14:108929582-108930097 - Intergenic
ENSMUSG00000058430 UCSC
Rpl27aP26 chr16:18762964-18763354 - Intragenic
ENSMUSG00000083658 UCSC
Rpl27aP27 chr16:22952834-22952996 - Intergenic
ENSMUSG00000116540 UCSC
Rpl27aP30 chr18:12498830-12499323 + Intragenic
ENSMUSG00000099663 UCSC
Rpl27aP31 chr18:21209687-21210191 - Intragenic
ENSMUSG00000062962 UCSC
Rpl27aP6 chr2:98121724-98122047 + Intergenic
ENSMUSG00000080802 UCSC
Rpl27aP2 chr2:116886022-116886527 + Intergenic
ENSMUSG00000074930 UCSC
Rpl27aP3 chr2:130226763-130227273 - Intergenic
ENSMUSG00000083483 UCSC
Rpl27aP4 chr2:174904207-174904707 + Intergenic
ENSMUSG00000084050 UCSC
Rpl27aP5 chr2:176777113-176777613 - Intragenic
ENSMUSG00000082023 UCSC
Rpl27aP8 chr3:24387207-24387717 + Intragenic
ENSMUSG00000057036 UCSC
Rpl27aP9 chr3:57850308-57850488 + Intergenic
ENSMUSG00000104730 UCSC
Rpl27aP7 chr3:145444494-145444870 - Intergenic
ENSMUSG00000105608 UCSC
Rpl27aP11 chr4:76711983-76712366 + Intragenic
ENSMUSG00000081890 UCSC
Rpl27aP10 chr4:142879126-142879969 + Intragenic
ENSMUSG00000081838 UCSC
Rpl27aP12 chr5:117486937-117487433 - Intragenic
ENSMUSG00000081274 UCSC
Rpl27aP13 chr6:116172341-116172844 - Intragenic
ENSMUSG00000082474 UCSC
Rpl27aP14 chr7:103871508-103872004 - Intragenic
ENSMUSG00000109712 UCSC
Rpl27aP15 chr7:141859544-141860054 - Intergenic
ENSMUSG00000083812 UCSC
Rpl27aP16 chr8:121323845-121324304 - Intergenic
ENSMUSG00000110601 UCSC
Rpl27aP18 chr9:72196925-72197434 + Intragenic
ENSMUSG00000098492 UCSC
Rpl27aP33 chrX:113683983-113684390 - Intergenic
ENSMUSG00000083561 UCSC
Rpl27aP17 chr8:32966875-32967379 - Intragenic
Intragenic
N/A UCSC
Rpl27aP28 chr16:44398579-44399074 + Intragenic
N/A UCSC
Rpl27aP29 chr17:35559991-35560365 + Intergenic
N/A UCSC
Rpl27aP32 chr18:49282247-49283180 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_011975.3
tcccttttccctttctgccACCGCCATGCCATCCAGACTGAGGAAGACCCGGAAACTCCGGGGCCACGTGAGCCACGGCCACGGCCGCATCGGTAAGCACCGCAAGCACCCAGGCGGCCGCGGGAATGCtggaggcatgcaccaccacaggaTCAACTTTGACAAATATCACCCAGGTTACTTTGGGAAAGTTGGTATGCGGCATTACCACTTGAAGAGGAACCAGAGCTTCTGCCCAACAGTCAACCTGGATAAACTGTGGACATTGGTCAGCGAGCAGACACGGGTCAATGCGGCAAAAAACAAGACTGGAGTTGCTCCCATCATTGATGTTGTTCGATCAGGCTACTACAAAGTTCTGGGCAAGGGAAAGCTCCCTAAGCAACCTGTCATCGTGAAGGCCAAATTCTTCAGCAGAAGAGCTGAGGAGAAGATTAAGGGTGTTGGAGGTGCCTGTGTTCTGGTGGCTTAAAAGCCACACCGGAGGTTAATTAAATGCTAACATTTTCCATGTGGTCTTTGCATCCTTCCTTGTCTGCATGTTGGAAATCTGCCTAACATTCTAGGAAGAGGTGAGGTGTGGGCCCTTGAGAGTCAGTCTGTGGGAATAAGTGTAGCCCAACTATGCACAGTTGTAAATTCCTACATCCCCGTGTGTATTGGTCTTGATATTCAAAGAATTGATGAATGCCATTACTTTCAGTCCAAAGTGAagaaacctggtctcaaaaaatcCCGAGGACCAGAAATGAGATGGGTTTTCCTGAAAATCTAAAGTTCTTGAAAAACCTTGCCATCCAGATTGCTAGCAACTGCCTAGCTTTGTAAGCTTACTGTGATGGACAGGTAGCTCAGGACGACTGGTCACTTAATACTGGACAGATTAGCATGGAAAACTTaaggggaggaggaggtagtAGGTTCCATCCAGCTTCGCTTTGTTGGTGGCATCTAGGTGTTGTTCCAAGGGAGCATGCCTACCTGCAACAGGACATCACTGGTTGGGAATACTGTAGAACCAGAGCTGTGACCTTTGAACTactagaaagatgaaattttatgTAAAGAGTACCttggagtaaataaataaagcccaaGATCCTGATTGTCTA