Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name GCSH
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name glycine cleavage system protein H
Also known as GCE|NKH
Coordinate chr16:81081945-81096395
Strand -
Gene summary Degradation of glycine is brought about by the glycine cleavage system, which is composed of four mitochondrial protein components: P protein (a pyridoxal phosphate-dependent glycine decarboxylase), H protein (a lipoic acid-containing protein), T protein (a tetrahydrofolate-requiring enzyme), and L protein (a lipoamide dehydrogenase). The protein encoded by this gene is the H protein, which transfers the methylamine group of glycine from the P protein to the T protein. Defects in this gene are a cause of nonketotic hyperglycinemia (NKH). Two transcript variants, one protein-coding and the other probably not protein-coding,have been found for this gene. Also, several transcribed and non-transcribed pseudogenes of this gene exist throughout the genome.[provided by RefSeq, Jan 2010]

Retrocopy(s) from GCSH

Retroname Coord Strand Genomic Region ENSG
GCSHP5 chr1:168055358-168056493 - Intragenic
ENSG00000224837 UCSC
GCSHP6 chr1:190797614-190797903 + Intergenic
ENSG00000238108 UCSC
GCSHP2 chr14:103184373-103184667 + Intergenic
ENSG00000259525 UCSC
GCSHP3 chr2:206115558-206116563 - Intergenic
ENSG00000237580 UCSC
GCSHP7 chr3:49252129-49252275 - Intragenic
ENSG00000270538 UCSC
GCSHP9 chr5:141895625-141896695 - Intergenic
ENSG00000226040 UCSC
GCSHP8 chr5:26670337-26670482 - Intergenic
ENSG00000250703 UCSC
GCSHP1 chr5:39888182-39888933 - Intergenic
ENSG00000248651 UCSC
GCSHP10 chr7:35765657-35768649 - Intergenic
ENSG00000232736 UCSC
GCSHP11 chr7:64582695-64584291 + Intergenic
ENSG00000224669 UCSC
GCSHP12 chr9:6276638-6277005 + Intergenic
ENSG00000228132 UCSC

Expression

Transcript Sequences

>NM_004483.5
ACCGCCTCCGCGCCTCCATCCAGCCGGCTCCCTCCGGCCGCGAACTGCCCCTCCCCGCCCCGCCTCCCGGCGCGGGTGGCCGAGGCGTAGCGCTGCGACCCCCGCACCCCTGCGAACATGGCGCTGCGAGTGGTGCGGAGCGTGCGGGCCCTGCTCTGCACCCTGCGCGCGGTCCCGTCACCCGCCGCGCCCTGCCCGCCGAGGCCCTGGCAGCTGGGGGTGGGCGCCGTCCGTACGCTGCGCACTGGACCCGCTCTGCTCTCGGTGCGTAAATTCACAGAGAAACACGAATGGGTAACAACAGAAAATGGCATTGGAACAGTGGGAATCAGCAATTTTGCACAGGAAGCGTTGGGAGATGTTGTTTATTGTAGTCTCCCTGAAGTTGGGACAAAATTGAACAAACAAGATGAGTTTGGTGCTTTGGAAAGTGTGAAAGCTGCTAGTGAACTCTATTCTCCTTTATCAGGAGAAGTAACTGAAATTAATGAAGCTCTTGCAGAAAATCCAGGACTTGTAAACAAATCTTGTTATGAAGATGGTTGGCTGATCAAGATGACACTGAGTAACCCTTCAGAACTAGATGAACTTATGAGTGAAGAAGCATATGAGAAATACATAAAATCTATTGAGGAGTGAAAATGGAACTCCTAAATAAACTAGTATGAAATAACGCAAGCCAGCAGAGTTGTCTTAAATTAGTGGTGGATAGAAGACTTAGAATAGAAACTTTTAGTATTACCGATGGGGAAAAAAAAACTACTGTTAACACTGCTAATGAAAGAAAATGCCCTTTAACTTTCTAATGATTATAGATAAATATAATATGCGTCTTTTTCACAATATCCTATGATTTTTAGACTAGGCTCTAGTGTTCAGAATTCATGAAATTATCCATGGTAAAAACTAGTTATAAAAATTACATAATTCAAAGATAACATTGTTATTCTTAAGCCTTATATAATATTGTAACTTGCATGTATCCATACCTGGATTTGGGATGAAATACTTAATGATCTTTCCATTGGAAATAACTGGAAGTGAAGAGGTTTTGTTGCTTGTACAGTGTCAGATGAGGAACACCACTATCTTAATTTTGCGATACACTGCATTTGCTGGTGCTATTTTTATACAGTGAAGCAACAGCTTTGCAGCAAAATAATAAAATACTTCTTCGTTAATCATGTTTGTTTTGATGTTAATATTTCATTTAGTAACTCTGCTAGTATTTGTGAAAGTGCTAACTTTAACTTACGGAAAGTTACTTTTTAAAAGGAAATTTAAGCCAGAACAATGCAAAGCTCCAAGAAAATGTTTTCTTTAGTCACAAATCTGGTTTTTCTTAAGCCAAGATCTGTCACCTTTAACATAATAAAAAATAAATCACCAACTTTGATTTTCTATCATGCGAGGTCTGAAGAAAGAAGAGGAAAGACAGAGGAAGGTGGAAGTTTTGATCAGTATAGCACATGGTGTTTTTAAGTTGTTAAACCACGTTCAGGTTTCCACTTAAGTCATGGGAATAAAAGTGGACAAGGACTGAAGCTTTATGAGCTCAGA