Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps15a
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S15A
Also known as A630031B11Rik
Coordinate chr7:117703597-117715370
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in positive regulation of cell cycle; positive regulation of cell population proliferation; and response to virus. Located in mitochondrion. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 20. Orthologous to human RPS15A (ribosomal protein S15a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps15a

Retroname Coord Strand Genomic Region ENSG
Rps15aP2 chr1:7206382-7206827 - Intragenic
ENSMUSG00000098201 UCSC
Rps15aP1 chr1:119427215-119427575 + Intragenic
ENSMUSG00000101437 UCSC
Rps15aP16 chr10:91476539-91476752 - Intergenic
ENSMUSG00000111782 UCSC
Rps15aP15 chr10:106028202-106028648 - Intergenic
ENSMUSG00000056877 UCSC
Rps15aP17 chr11:6122607-6123053 - Intragenic
ENSMUSG00000083022 UCSC
Rps15aP18 chr11:69521709-69522154 - Intergenic
ENSMUSG00000083485 UCSC
Rps15aP19 chr12:35811357-35811780 - Intergenic
ENSMUSG00000114058 UCSC
Rps15aP20 chr15:27636579-27637009 + Intergenic
ENSMUSG00000115578 UCSC
Rps15aP21 chr19:28719522-28719968 - Intergenic
ENSMUSG00000067351 UCSC
Rps15aP4 chr2:34302961-34303359 - Intragenic
ENSMUSG00000083503 UCSC
Rps15aP3 chr2:152027174-152027619 - Intergenic
ENSMUSG00000081087 UCSC
Rps15aP7 chr4:53791069-53791471 - Intergenic
ENSMUSG00000084403 UCSC
Rps15aP6 chr4:150931554-150932000 + Intergenic
ENSMUSG00000084314 UCSC
Rps15aP8 chr5:105945152-105945596 - Intergenic
ENSMUSG00000067058 UCSC
Rps15aP9 chr5:136925480-136925926 + Intergenic
ENSMUSG00000104707 UCSC
Rps15aP10 chr6:115086303-115086672 + Intergenic
ENSMUSG00000107941 UCSC
Rps15aP13 chr9:65204830-65205216 - Intragenic
ENSMUSG00000059571 UCSC
Rps15aP14 chr9:83362084-83362356 + Intergenic
ENSMUSG00000099816 UCSC
Rps15aP12 chr9:108208506-108208724 + Intragenic
ENSMUSG00000102554 UCSC
Rps15aP5 chr4:131947319-131947765 - Intragenic
ENSMUSG00000083757 UCSC
Rps15aP11 chr6:76715168-76715316 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_170669.2
CTTCCCTCGCCGCCACCATGGTGCGAATGAATGTTCTGGCGGATGCTCTCAAGAGCATCAACAACGCTGAGAAGAGAGGCAAACGCCAGGTCCTCATCAGGCCATGTTCTAAAGTCATCGTTCGGTTCTTAACCGTGATGATGAAGCACGGATACATTGGTGAATTTGAGATCATTGATGATCACAGAGCTGGGAAGATTGTTGTGAACCTCACAGGAAGGTTGAACAAGTGTGGCGTTATAAGCCCTAGATTTGATGTTCAACTCAAAGACCTAGAGAAATGGCAGAACAACCTGCTCCCTTCACGTCAGTTTGGCTTCATTGTGCTGACAACCTCGGCTGGCATTATGGACCATGAAGAGGCAAGACGAAAACATACAGGAGGGAAAATCctgggattctttttttaaacGTAAAGCATAAATAAAAAGCCTTTGTGGACTGTGCTCAGGGTCAGTCCTTTTGAATCTCTGCAGCAGAGTAGCTGGCTGTGCTGACTGGTGACACTTCTGGTGATGCTCAGCTGTGAGGTTTTATGTAGATATTGAAAGCATGACCATTGTCTTCACTTCACCTCCAGCTTGGGTTGTATGCCAGTAACATCAGCATAAGGTGGTTAATGACAGGATGGTCCCTTGAGTGTGCAGTGAGTCTGGTTTATTTGCCAATGAGAAGCACAGGCCTCCTGTATGGGTCTTTGCCTACAGCCCCCTTTCATCACCCAGACTTGGTAGACTTACATTCTGTCACACTGTTGGCTCTTAATCTCAGCCCTGAAAAATGCCATTTCTTGGGTATCAAGGCTAGTCTAGATTCAGAAACCATATAAAGGTTGAcagctggtttaaaaaaaaaaaggcttggaGCTTGAGTTGGGTTCGCAGGTTATTCCAGGGTATCTGTCTGCACTTTGTCTCCCAGATTTAAAGgtaagtgccaccatgcctagcatgGTGACTTATTAGCTTTGTTGCTGTGGAACATACATCAAATGAAACATTGGTATGGCTCTGGTTTCACTGTCCATGGTTAGTATCTGGTGGGTGGACACCTGGTGGAACCAAGCTGCTCATCCCAGAACTAAGGAGCCATTCCCCAGAGACTTGTCTTCCTACTAAGTTCCATCCCTACAGCTTCTAGTAGTAGCTTCAGAGGTTGTGAATTGTGGACTTAGTCTGCCATAACATTTAAAATAggtattaaattcaagtcattTGGTcactcagcacccacgtggctcTTCAGAACAACAGAAGCCCCTCGGACTTGTCTGTTGGAAAAACCAGTTTGAAATAATGTACCTGCTTTAGTTGAGAAAACGCTACAACTGGTGCTGTGTCCTGCCATGCTGATGAGCTCTGCTCTGCGACCTGCCGAACTTGGGGGATCTCTACCCCCAGACTTTGCTCAGATCTGTTGATGATTTGTCCATGCAGGAAAGTTTACAAGGTCTCTGTGTGTCTACTACTTActagttgctgtgacaaaaatacTGAAAGTGTTTACTGTGTGTGAGGCACAAAGTTTGTGGGAAGCTGTACCCTCCCTCATTTTGGTGCTGCTCCTGCCTTGACTGACAGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTCTATTGAGTTCCCTGGAGGTGATCCCAAGGGAAGGAGGAGCCTGGGAAAGTGGATCTCAAGTCCCCTAGTCTGGCAGTTGGCTGTTTAGGAAAGTCCAGTGTCAGTGTTTGAtatgttgtaaggaaacaaattCAGTTTTATTTAGCTTATTGGCTCTGGGGAAATGGCAGTTCCCATTAATTGGTGCTGTCTTTCTCTTTGAGGATCAAAATTAGCTTCCTGTTCAGTTGTTAAGCATATTTCATAGTCAAATAATCCTCTTATCTTTACAAGTGAGGTTTTCCTTCGAGTGGATATCAGAGTCCCTCCCACGGCTTCTATCCCTCCTATCCTTGTGTAGGAAGTTAAGCTTGCTCATTTGTAGATTAGTGGTCGGTTACACTGCAATTTAGAGTATCATGTGTACTCTACACATGATTGATTCTAAGCCCCCTTCCCTTTCCATGTCcttcaaaaatttttttattcTGAGACAGTGTTAGGATTTTTCCTGGGCTAGCCAAATGCAAGAAGTGTTGGTCCCAGACTTGTAAtctttctgccttagcctcccaaattCTAGGATTATAGATTTATGTCATGTGATGAGTGGTCTTTTAaagattatcttttattttttttgagatggggtttttctgtgtagttttggctttcttgggacttgctctgtagacccagGATGGTCTTTactcagatctgcttgcctctgcctcccaactgctaggattaaagcatGAGCCTGAGCCTTCATGCCTGGCTGACAGGTGAATTCTCAATACCTACCTAGCCATAGGGAAAGTGATTGTGTCCCCTTCCTCATAGAGGGGCATAGTCACCCAGGCCATACCTTTAGCTTGGGCTTTTGGTCAGTGAAGAAGTATGAAGGGACAAGAACACTATCAAGAGCCTAATGTGCTCTGGCCTGGATGGTCAGCACAAAATGAATAGACTTACCAAATTCTGCTGTCTCCTTGGTAGATGTGAAGTTGTTGGAAGAGTCCTAAATTTAGCAGACTATACTGTCAGCCTATCAGACTATAGGCTGCCGGAGGGCAAGTCTGCTACCTATTTCCATCTCATGCCTGCATTGTTCATCCCCCTATGTAACCCACCTACCTGTCACTCATTCCTCCATCCAAAAACTATTGTAGGTTCAGTGGAAATTTCAAGCTTGCCTGTCTCAGCATCTTTCTTACCTTACCCCTAAGGATGGCATCTCTCTTGGCTACATCTTTGGTTTATCTGGAGATCCTTGATTAATTTGAACAAGAGCTACCTTGGGTTATGCAGTTTATGCCTCCAGTGTCCCAGAGACCGGCATTTGAGAGATCCCTGATAGCAAACCCATAGGGTGGCCTTTTTTTCATCCACCCcattctccctcccacctccctctttTGACCTTGAGTCCTCACCAGAGAGAAACCAGGCCCACTTAATTAGTTCTACATGTGTACACTACATGGGTGCAGTGCCCAAGCAGGAGAGGTGTTAGATTCCCTTTTAACTATAGTTAATAGACAGTTTTTAAGCCccagtggatgctgggaagcaaacctacatcctctagaagagcagctatttctctgagccatttctccagcaccattttCCCCTCTTTTAAAAGCAGGTCTTGCAGTGTGGCCTAGTCTGGCCCCCTGAGGTGTTTGCATTGCATGGCAGGCATGTCCACAGGAACACCATAGTTCTCACCACTCGTACAGCACAGCAAGTGGGGTGCCGCAGGGGATTATCACTTGAGTATAAAATAAGGGTTGCTTTAGATTGAATAGGATAACCACGCGTTCTCAGAACAATCAAGGAAGGCTGGGGTGAGCCAGCACCGACCTTAATTGTTTACTTAGTAAACTACTAAATGTATGCACGTGTAAGCTTTTGCCTTGATTGAGGTCAAGCTGTCGAGAAATGGTTCTCTTTACAGTGGATCCAGTCAggattggcagcaagcacctttgcctgctgagcctaCATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAAATGGGTTTTTCATTTACGaagtgtgctggctggttttgtgtcaacttgacacaagctggagttcagttgaggaaatgcctccatgagattcagcagTTTTCTCAGTGATGGGGGGATGGGGGctagccccttgtgggtggtgccatctctgggctggtaattcTGGGTTCTgtaagcaagctgaacaagccaggggaagcaagccagtaacattcctccatggcctctgcatcagctcctgcttcctgacctgcttgagttccagccctgacttccttggggatgaacagcagtgtggaagtgttaactgaataaaccctttcctccccaacttgcttcgtggtcatgttttgtgtaggaatagaaactctgacttaAGACATAATGGTTTTGAGATTATGGTTTTATTTATGACTATGGTGAGCCCTACTGAAGAAGCCTCAGCATTCAGATCTATCGTATCCTGCCAGTTGCTTGAAGCATGAATTTGAGTGTCCCTTCTAAATAGGTTTTCATTTCTGTGAAATGGGTACAAAGAGGCTATGTTCTAGTACTGTGGTCAGGCTTGGGATAAACTGTAAAATGAAAGTGGTGCTTGGCATAACActattttacttgtttttaatCCTGAGAGGGAGTCTGAATGCTTCTGGGAAGAAGATGTGGAGTCCGGACTGACCTGTCCTGACTATAGTATGTCTGCAGTCCTAATAACAGCCCCTGGGGGGTTCTTCACTCTTCTCAGCTTTTGTACTCAGAGTGATGGGGGCTAGTGAGGCTGCCATGTGGGAAATCTAATAACCAGGGGTATTGGGAAAATTGAGATCCTTTTCTGTAGATGATGAATGAGGGCAAAGAGAAGCAGTAAGTATTTGGGGCCTGAAGCAGAGAGATGAGGGGAAGGGAAGTTATAATGGAAGTCTTGAGTCAGCTGACAGGAATCATGAGTCAGCAGAAACCTGAGTGACCAGGAGTTGTGAGTCAGCAGAAAGTATAGATAGCAAAGATGATGAGTCACCATCATTCTTGGTGAATCAGGGCTGAACTGTTGTTACTGAAATTCCTTTTTGGGTTCTTGGTCTTATCAATGAGATAATTTAGGGGCTGGGACAATGGCTaggttgttaagagcacttgctgctcctgagTGGATTCAGGTTCGGTCCCCAGCACCTCCGTCGGGCTGCTCACACTAGCCTATGACTTGGGCTCCGGGGagtctgacaccctcctctggccttcaaGTGTGCTTGTACacgcctgggggtggggtggggggagatggagtaatgaaatgaaatttctgattttttaagtCTTTGAAAGTAAAATACAATTATGTTGGCCTCTCTCCCTGTCCTTTTCATTCAACCTCTCCTATGTGCTCTCCTCTTACTCAATTTCTCGAATTTATGGCCTCTCTTTGTGcgaacatgtgtgtgtgaataaaataaagcattttttttaaaa