Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ppia
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name peptidylprolyl isomerase A
Also known as Cphn|CyP-18|CypA|SP18
Coordinate chr11:6365867-6369817
Strand +
Gene summary Enables integrin binding activity and peptidyl-prolyl cis-trans isomerase activity. Involved in platelet aggregation. Acts upstream of or within neuron differentiation. Located in extracellular space and myelin sheath. Is expressed in several structures, including early conceptus; gonad; hemolymphoid system gland; liver; and skeletal muscle. Human ortholog(s) of this gene implicated in cholangiocarcinoma and human immunodeficiency virus infectious disease. Orthologous to human PPIA (peptidylprolyl isomerase A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ppia

Retroname Coord Strand Genomic Region ENSG
PpiaP1 chr1:17499062-17499795 - Intergenic
ENSMUSG00000102048 UCSC
PpiaP2 chr1:40902698-40903356 - Intergenic
ENSMUSG00000094136 UCSC
PpiaP3 chr1:64189287-64189883 + Intergenic
ENSMUSG00000086721 UCSC
PpiaP38 chr10:57658447-57659099 + Intergenic
ENSMUSG00000093552 UCSC
PpiaP39 chr11:26662913-26663253 + Intergenic
ENSMUSG00000082038 UCSC
PpiaP40 chr11:96987738-96988352 + Intergenic
ENSMUSG00000084068 UCSC
PpiaP41 chr12:60594359-60594684 - Intergenic
ENSMUSG00000113678 UCSC
PpiaP42 chr13:28694530-28695172 - Intergenic
ENSMUSG00000086785 UCSC
PpiaP43 chr13:64771878-64772618 - Intergenic
ENSMUSG00000113753 UCSC
PpiaP44 chr13:92855856-92856184 + Intergenic
ENSMUSG00000114631 UCSC
PpiaP45 chr14:28939559-28940301 + Intragenic
ENSMUSG00000075245 UCSC
PpiaP46 chr14:35542564-35543029 + Intergenic
ENSMUSG00000115375 UCSC
PpiaP47 chr14:60679478-60679958 + Intergenic
ENSMUSG00000114948 UCSC
PpiaP48 chr14:62752088-62752747 - Intergenic
ENSMUSG00000114292 UCSC
PpiaP49 chr15:25839997-25840737 - Intergenic
ENSMUSG00000115593 UCSC
PpiaP52 chr17:4930857-4931595 + Intergenic
ENSMUSG00000116620 UCSC
PpiaP51 chr17:38258059-38258778 + Intergenic
ENSMUSG00000092186 UCSC
PpiaP53 chr17:63877894-63878445 + Intergenic
ENSMUSG00000117256 UCSC
PpiaP54 chr17:93283948-93284429 + Intergenic
ENSMUSG00000117409 UCSC
PpiaP55 chr18:14557880-14558570 + Intergenic
ENSMUSG00000055795 UCSC
PpiaP57 chr18:21465518-21465715 - Intergenic
ENSMUSG00000117590 UCSC
PpiaP58 chr18:34179848-34180353 + Intergenic
ENSMUSG00000118246 UCSC
PpiaP59 chr18:87492105-87492840 - Intergenic
ENSMUSG00000117969 UCSC
PpiaP60 chr19:16141473-16142212 - Intragenic
ENSMUSG00000057990 UCSC
PpiaP61 chr19:28010866-28011547 + Intergenic
ENSMUSG00000117788 UCSC
PpiaP6 chr2:30814175-30814366 - Intergenic
ENSMUSG00000084143 UCSC
PpiaP7 chr2:39414821-39415277 - Intergenic
ENSMUSG00000081839 UCSC
PpiaP8 chr2:51760933-51761673 - Intergenic
ENSMUSG00000087701 UCSC
PpiaP9 chr2:83220434-83221162 + Intergenic
ENSMUSG00000083291 UCSC
PpiaP4 chr2:129591789-129592532 + Intergenic
ENSMUSG00000084328 UCSC
PpiaP15 chr3:39271709-39271985 - Intergenic
ENSMUSG00000107333 UCSC
PpiaP16 chr3:41440136-41440846 + Intergenic
ENSMUSG00000104616 UCSC
PpiaP17 chr3:53574076-53574728 - Intergenic
ENSMUSG00000105840 UCSC
PpiaP10 chr3:101218229-101218798 + Intergenic
ENSMUSG00000106316 UCSC
PpiaP11 chr3:121173709-121174343 - Intergenic
ENSMUSG00000106455 UCSC
PpiaP13 chr3:134071308-134071874 - Intergenic
ENSMUSG00000104530 UCSC
PpiaP14 chr3:138310475-138310838 - Intergenic
ENSMUSG00000105396 UCSC
PpiaP20 chr4:90745188-90745814 + Intergenic
ENSMUSG00000082622 UCSC
PpiaP18 chr4:105651372-105652108 + Intergenic
ENSMUSG00000083780 UCSC
PpiaP19 chr4:117682175-117682891 - Intergenic
ENSMUSG00000083507 UCSC
PpiaP23 chr5:64477555-64478301 + Intragenic
ENSMUSG00000083100 UCSC
PpiaP24 chr5:91954231-91954975 - Intergenic
ENSMUSG00000096726 UCSC
PpiaP22 chr5:124610488-124611048 + Intragenic
ENSMUSG00000082402 UCSC
PpiaP27 chr6:65972617-65973520 + Intergenic
ENSMUSG00000108100 UCSC
PpiaP28 chr6:71618390-71619118 - Intergenic
ENSMUSG00000108772 UCSC
PpiaP29 chr6:78473914-78474435 - Intergenic
ENSMUSG00000108073 UCSC
PpiaP25 chr6:107070417-107071056 - Intergenic
ENSMUSG00000107981 UCSC
PpiaP26 chr6:123195710-123196449 - Intergenic
ENSMUSG00000083713 UCSC
PpiaP32 chr7:17526455-17527192 + Intergenic
ENSMUSG00000063830 UCSC
PpiaP33 chr7:97567449-97567835 + Intragenic
ENSMUSG00000108424 UCSC
PpiaP30 chr7:107618188-107618913 + Intragenic
ENSMUSG00000108844 UCSC
PpiaP31 chr7:120614159-120614899 - Intragenic
Intragenic
ENSMUSG00000058050 UCSC
PpiaP34 chr8:4515707-4516208 + Intergenic
ENSMUSG00000108860 UCSC
PpiaP36 chr9:63024518-63025143 + Intergenic
ENSMUSG00000111297 UCSC
PpiaP37 chr9:96777667-96778407 + Intragenic
ENSMUSG00000062933 UCSC
PpiaP35 chr9:122307903-122308150 + Intergenic
ENSMUSG00000110725 UCSC
PpiaP62 chrX:10886549-10887181 - Intergenic
ENSMUSG00000083419 UCSC
PpiaP63 chrX:12810631-12811199 - Intergenic
ENSMUSG00000083751 UCSC
PpiaP65 chrX:22172001-22172524 - Intergenic
ENSMUSG00000081064 UCSC
PpiaP66 chrX:70021944-70022651 + Intergenic
ENSMUSG00000080938 UCSC
PpiaP64 chrX:141188736-141189449 - Intergenic
ENSMUSG00000082929 UCSC
PpiaP12 chr3:122050338-122051073 + Intragenic
ENSMUSG00000093392 UCSC
PpiaP5 chr2:166341990-166342725 - Intergenic
N/A UCSC
PpiaP21 chr5:121241221-121241595 - Intergenic
N/A UCSC
PpiaP50 chr15:40545485-40546222 + Intragenic
N/A UCSC
PpiaP56 chr18:16327091-16327705 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_008907.2
CGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCCATGGTCAACCCCACCGTGTTCTTCGACATCACGGCCGATGACGAGCCCTTGGGCCGCGTCTCCTTCGAGCTGTTTGCAGACAAAGTTCCAAAGACAGCAGaaaacttTCGAGCTCTGAGCACTGGAGAGAAAGGATTTGGCTATAAGGGTTCCTCCTTTCACAGAATTATTCCAGGATTCATGTGCCAGGGTGGTGACTTTACACGCCATAATGGCACTGGCGGCAGGTCCATCTACGGAGAGAAATTTGAGGATGAGAACTTCATCCTAAAGCATACAGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCAAACACAAACGGTTCCCAGTTTTTTATCTGCACTGCCAAGACTGAATGGCTGGATGGCAAGCATGTGGTCTTTGGGAAGGTGAAAGAAGGCATGAACATTGTGGAAGCCATGGAGCGTTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTTCCGACTGTGGACAGCTCTAATTTCTTTTGACTTGCGGGCATTTTACCCATCAAACCATTCCTTCTGTAGCTCAGGAGAGCGTCCCTACCCCATCTGCTCGCAATGTCCTGTAATCTCTGCTCTCACTGAAGTTCTTTGGGTTCCATATTTTCCTCATTCCCCTTCAAGTCTAGCTGGATTgcaaagttaagtttatgattatgaataaaaactaaataagaacTGTT