Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl23a
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L23A
Also known as MDA20
Coordinate chr11:78071761-78074410
Strand -
Gene summary Enables TORC2 complex binding activity. Predicted to be involved in ribosomal large subunit assembly. Predicted to be located in cytosolic ribosome and nucleus. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in brain. Orthologous to human RPL23A (ribosomal protein L23a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl23a

Retroname Coord Strand Genomic Region ENSG
Rpl23aP3 chr1:46020690-46021214 + Intergenic
ENSMUSG00000070896 UCSC
Rpl23aP4 chr1:52129742-52130117 - Intragenic
ENSMUSG00000078291 UCSC
Rpl23aP1 chr1:121448308-121448815 + Intragenic
ENSMUSG00000081130 UCSC
Rpl23aP2 chr1:160720677-160721204 + Intergenic
ENSMUSG00000057499 UCSC
Rpl23aP22 chr10:14398808-14399340 + Intragenic
ENSMUSG00000071532 UCSC
Rpl23aP23 chr10:59707013-59707516 - Intergenic
ENSMUSG00000112673 UCSC
Rpl23aP24 chr10:81529501-81530025 - Intergenic
ENSMUSG00000112001 UCSC
Rpl23aP26 chr11:29790345-29790885 + Intragenic
ENSMUSG00000080851 UCSC
Rpl23aP27 chr11:70770221-70770756 + Intragenic
ENSMUSG00000081968 UCSC
Rpl23aP25 chr11:108607342-108607782 + Intragenic
ENSMUSG00000083723 UCSC
Rpl23aP28 chr12:24826189-24826568 - Intergenic
ENSMUSG00000113018 UCSC
Rpl23aP31 chr13:64850957-64851499 + Intergenic
ENSMUSG00000113469 UCSC
Rpl23aP32 chr13:76832099-76832580 - Intragenic
ENSMUSG00000096216 UCSC
Rpl23aP29 chr13:108369574-108370094 - Intragenic
ENSMUSG00000114507 UCSC
Rpl23aP30 chr13:120765681-120766215 - Intragenic
ENSMUSG00000078180 UCSC
Rpl23aP33 chr14:33892599-33893130 + Intergenic
ENSMUSG00000078126 UCSC
Rpl23aP35 chr14:70912016-70912385 + Intragenic
ENSMUSG00000115387 UCSC
Rpl23aP36 chr14:77489235-77489767 - Intragenic
ENSMUSG00000063556 UCSC
Rpl23aP37 chr15:37943517-37944039 - Intragenic
ENSMUSG00000085442 UCSC
Rpl23aP38 chr15:85001024-85001540 + Intragenic
ENSMUSG00000078289 UCSC
Rpl23aP40 chr19:30508956-30509280 - Intergenic
ENSMUSG00000117953 UCSC
Rpl23aP5 chr2:132504161-132504655 + Intergenic
ENSMUSG00000081445 UCSC
Rpl23aP6 chr3:47184989-47185433 - Intergenic
ENSMUSG00000102220 UCSC
Rpl23aP7 chr4:32149855-32150270 + Intergenic
ENSMUSG00000083872 UCSC
Rpl23aP8 chr4:33452460-33452671 - Intragenic
ENSMUSG00000081206 UCSC
Rpl23aP9 chr4:37238673-37239153 - Intergenic
ENSMUSG00000082732 UCSC
Rpl23aP10 chr4:53308488-53308720 + Intergenic
ENSMUSG00000083735 UCSC
Rpl23aP14 chr6:58438042-58438574 + Intergenic
ENSMUSG00000093747 UCSC
Rpl23aP15 chr6:85866294-85866964 + Intergenic
ENSMUSG00000106784 UCSC
Rpl23aP17 chr6:92257845-92258379 - Intergenic
ENSMUSG00000108279 UCSC
Rpl23aP11 chr6:112370259-112370790 - Intergenic
ENSMUSG00000107541 UCSC
Rpl23aP12 chr6:125716458-125716788 + Intragenic
Intragenic
ENSMUSG00000089834 UCSC
Rpl23aP13 chr6:143070268-143070787 - Intragenic
ENSMUSG00000107693 UCSC
Rpl23aP18 chr7:31170311-31170835 - Intergenic
ENSMUSG00000099795 UCSC
Rpl23aP19 chr7:33950444-33950969 + Intragenic
ENSMUSG00000078380 UCSC
Rpl23aP20 chr7:66643737-66644173 - Intragenic
ENSMUSG00000108873 UCSC
Rpl23aP21 chr8:73037483-73038006 - Intergenic
ENSMUSG00000110443 UCSC
Rpl23aP41 chrX:11733639-11733995 + Intergenic
ENSMUSG00000082146 UCSC
Rpl23aP43 chrX:19759878-19760413 + Intergenic
ENSMUSG00000080998 UCSC
Rpl23aP42 chrX:155462282-155462805 - Intergenic
ENSMUSG00000083573 UCSC
Rpl23aP16 chr6:91297505-91298037 - Intergenic
N/A UCSC
Rpl23aP34 chr14:6017561-6018095 + Intergenic
N/A UCSC
Rpl23aP39 chr18:34177572-34178054 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_207523.2
AAGCTCATGGGAATTGGGCTGGGCCATCCTTTTCAGCCAAGATGGCGCCGAAAGCGAAGAAGGAAGCTCCTGCCCCTCCCAAAGCCGAAGCCAAAGCGAAGGCCTTGAAAGCTAAGAAGGCGGTGCTGAAAGGCGTCCACAGCCACAAAAAGAAGAAGATCCGAACGTCACCCACCTTCCGGCGGCCCAAGACCCTGCGGCTCCGGAGGCAGCCAAAATATCCTCGGAAGAGTGCGCCCAGGAGAAACAAGCTTGACCACTATGCTATCATCAAATTCCCACTGACCACGGAGTCAGCCATGAAGAAAATAGAGGACAACAACACTCTTGTGTtcattgtggatgtcaaggccaATAAGCATCAGATCAAACAGGCTGTCAAGAAACTCTATGACATCGATGTGGCCAAAGTCAATACCCTGATAAGGCCCGACGGAGAGAAGAAGGCGTATGTTCGCTTGGCTCCTGATTATGATGCCCTAGATGTTGCCAACAAGattggGATCATCTAAACTGAGTCCAGATGGCTAAttctaaatatatacttttttcacCATAAA