Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ell3
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name elongation factor RNA polymerase II-like 3
Also known as A930015D22Rik
Coordinate chr2:121269508-121273082
Strand -
Gene summary Enables cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including positive regulation of transcription by RNA polymerase II; regulation of epithelial to mesenchymal transition; and transcription by RNA polymerase II. Acts upstream of or within negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; positive regulation of neural precursor cell proliferation; and positive regulation of neurogenesis. Located in nucleus. Is expressed in embryo endoderm and olfactory epithelium. Orthologous to human ELL3 (elongation factor for RNA polymerase II 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ell3

Retroname Coord Strand Genomic Region ENSG
Ell3P3 chr7:15962823-15963027 + Intragenic
 ENSMUSG00000110413 UCSC
Ell3P1 chr2:104508810-104509066 + Intragenic
 N/A UCSC
Ell3P2 chr7:127025574-127025803 + Intergenic
 N/A UCSC
Ell3P4 chr7:82274204-82274365 - Intergenic
 N/A UCSC
Ell3P5 chr17:35488170-35488382 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_145973.2
GCCAGCCTAGGCTTGCACAGCAGAGGTGGCCCTCACCTGTGGTCCCGGTTCTGCATGTGCGCGACTTTGGCACCATGGAGGGGACCCAGGAAGCTCTGAGTGGGAAAATGCGGCTCCTCTTCACCCCCGCTGCTCGGACCAGCCTCCTGATGCTAAGGCTCAACGAGGCGGCGCTGCGGGCATTGCAAGAGTGTCAGCAGCAACAGGTACGGCCAGTGATCGCTTTCCAAGGCCACCGAGGGTACCTAAGGTTTCCAGGCCCGGGATGGTCCTGCCTTTTCTCCTTCATAGTATCCCAGTGTGGCCAAGAGGGCACTAATGGTGGCTTGGACCTTGTGTACCAACGCTTAGGCAGATCTGGGCCGAACTGTCTCCACTGCCTGGGCTCCCTTAGAGAGCGACTCACTATTTGGGCAGCCATGGATACTATCCCAGCTCCACTGTTAGCTCAGGAACACCTGACTGAAGGTACCAGAGAGTCTGAGAGCTGGCAGGACACTGGAGACGAACCTGAAGGCCATCCCCAGCTGGCACCAGATGAGGTGTCTGACCCACTGGCAAGCCACCATGAACAGTCACTCCCAGGATCCTCCAGTGAGCCCATGGCACAATGGGAAATGAGGAACCACACTTATCTTCCAAGCAGAGAGCCTGATCAGTCCCTGCTTTCCCCTGCTAGCCAGAAACGCCTGGACAAGAAACGTTCAGCACCTATAACCACTGAAGAACCAGAGGAAAAGAGGCTCAGAGCTCTGCCTCTAGCCTCAAGTCCACTACAAGGGCTAGCAAATCAGGACTCACAAGAGGGAGAAGACTGGGGccaagatgaagatgaagagggagatgaagatggagattCCAGGCTTGAGCAGAGCCTCTCAGCTCCATCAGCCTCTGAATCCCCAAGCCCTGAGGAGGTACCAGATTATCTCCTGCAATACAGAGCCATCCACAGCACAGAGCAGCAACAGGCCTATGAGCAGGACTTTGAGACCGACTATGCTGAGTACCGCATTCTGCATGCTCGAGTTGGGGCTGCAAGCCAGAGGTTCACAGAGCTGGGGGCAGAGATCAAGAGACTTCAGCGAGGAACTCCAGAACACAAGGTGCTGGAAGACAAGATAGTCCAGGAGTATAAAAAGTTCAGAAAGCGGTATCCAAGTTACAGGGAGGAGAAGCATCGCTGTGAGTACCTGCATCAGAAACTGTCCCACATTAAAGGTCTCATCCTGGAATTTGAGGAGAAGAACAGGGGCAGCTGAGACTGTCCAGAGGGCTCGGATCTTCCCCGGTGATGAACACAACAGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGGTTCTTGCAGTTTGATTTTTGATGTTGCCATAATTTTTTTTAGGGTGTGGGCATGGTATCATCTCCTCAGCTGTGCCAGGAGACTAGGAAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCTAGATCCTGAAAAGTGACATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGCCTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAAAATTAAAACTGATTGCTTCTG