Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl13
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L13
Also known as A52|L13
Coordinate chr8:123829089-123831983
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in bone development. Predicted to be located in cytosolic ribosome; endoplasmic reticulum; and nucleolus. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in retina. Orthologous to human RPL13 (ribosomal protein L13). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl13

Retroname Coord Strand Genomic Region ENSG
Rpl13P1 chr1:39636579-39637212 - Intergenic
ENSMUSG00000102471 UCSC
Rpl13P16 chr11:16186918-16187591 + Intergenic
ENSMUSG00000082410 UCSC
Rpl13P17 chr11:85001913-85002661 + Intragenic
ENSMUSG00000082806 UCSC
Rpl13P18 chr12:54669318-54670044 + Intergenic
ENSMUSG00000112145 UCSC
Rpl13P20 chr13:58904327-58905018 + Intergenic
ENSMUSG00000114325 UCSC
Rpl13P23 chr14:59130915-59131616 + Intergenic
ENSMUSG00000059835 UCSC
Rpl13P24 chr16:58375480-58376147 - Intergenic
ENSMUSG00000116914 UCSC
Rpl13P25 chr16:88478946-88479655 - Intergenic
ENSMUSG00000116547 UCSC
Rpl13P26 chr17:78416397-78416932 + Intergenic
ENSMUSG00000117352 UCSC
Rpl13P3 chr2:69596487-69597186 + Intergenic
ENSMUSG00000083007 UCSC
Rpl13P2 chr2:108276754-108277272 - Intergenic
ENSMUSG00000083590 UCSC
Rpl13P5 chr3:30882737-30882878 - Intergenic
ENSMUSG00000104361 UCSC
Rpl13P6 chr3:58894552-58895268 + Intergenic
ENSMUSG00000059776 UCSC
Rpl13P7 chr3:92571504-92572181 + Intergenic
ENSMUSG00000104215 UCSC
Rpl13P4 chr3:107775292-107775989 - Intergenic
ENSMUSG00000105944 UCSC
Rpl13P8 chr4:10848392-10849097 + Intergenic
ENSMUSG00000066315 UCSC
Rpl13P9 chr4:52240865-52241572 + Intergenic
ENSMUSG00000083539 UCSC
Rpl13P10 chr5:66355249-66355759 - Intergenic
ENSMUSG00000084108 UCSC
Rpl13P11 chr5:92288110-92288825 - Intragenic
ENSMUSG00000084111 UCSC
Rpl13P13 chr7:142310991-142311620 - Intragenic
ENSMUSG00000078192 UCSC
Rpl13P14 chr8:77121716-77122388 - Intragenic
ENSMUSG00000110595 UCSC
Rpl13P30 chrX:52403370-52404085 + Intragenic
ENSMUSG00000081145 UCSC
Rpl13P31 chrX:93833284-93833956 + Intragenic
ENSMUSG00000082964 UCSC
Rpl13P29 chrX:149489947-149490631 - Intergenic
ENSMUSG00000082961 UCSC
Rpl13P28 chrX:102550391-102551143 + Intragenic
ENSMUSG00000082383 UCSC
Rpl13P12 chr6:14948475-14949136 + Intragenic
N/A UCSC
Rpl13P15 chr9:55532084-55532413 + Intragenic
N/A UCSC
Rpl13P19 chr13:34181070-34181484 - Intragenic
Intragenic
N/A UCSC
Rpl13P21 chr14:14343873-14344527 - Intragenic
Intragenic
N/A UCSC
Rpl13P22 chr14:3943334-3943738 + Intergenic
N/A UCSC
Rpl13P27 chr19:15170884-15171597 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_016738.5
TTTTGATTGGCGTTTGAGATTGGCCGGACTCCCTACAAGCCCAGGGTGCTTTGCGGTGCCCGGTCCTTTCCGCTCGGCCGTTCTCCTGTATAGGAGGCAGCCATGGCGCCCAGCCGGAATGGCATGATACTGAAGCCCCACTTCCACAAGGATTGGCAGCAGCGAGTGGACACTTGGTTCAACCAGCCGGCGCGCAAGATCCGCAGGCGCAAGGCCCGGCAGGCGAAAGCGCGTCGCATCGCCCCTCGCCCCGCGTCCGGCCCCATCAGGCCCATCGTGAGGTGCCCTACAGTGAGATACCACACCAAGGTCCGGGCTGGCAGGGGCTTCAGCCTGGAGGAGCTCAGGGTGGCTGGCATCCACAAGAAAGTGGCTCGCACCATCGGCATCTCTGTGGACCCGAGGAGGCGAAACAAGTCCACGGAGTCACTGCAGGCCAACGTGCAGCGCCTGAAGGAGTACCGCTCCAAGCTCATCCTGTTCCCCAGGAAGCCTTCTGCTCCGAAGAAGGGAGACAGTTCTGCTGAAGAACTTAAGCTGGCCACCCAGCTGACAGGACCTGTGATGCCCATCCGGAATgtgtacaaaaaggaaaaggccagagttatcacagaagaagagaagaactTTAAGGCTTTTGCCAGTCTCCGAATGGCCCGTGCCAATGCCCGACTCTTTGGCATCCGAGCAAAAAGGGCGAAGGAAGCTGCAGAGCaagatgttgaaaagaaaaaataattctgtGTTGGAGAGCTGCAATAAATTTTCCATAAAGCAAAA