Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TAF5L
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name TATA-box binding protein associated factor 5 like
Also known as PAF65B
Coordinate chr1:229593111-229626122
Strand -
Gene summary The product of this gene belongs to the WD-repeat TAF5 family of proteins. This gene encodes a protein that is a component of the PCAF histone acetylase complex. The PCAF histone acetylase complex, which is composed of more than 20 polypeptides some of which are TAFs, is required for myogenic transcription and differentiation. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors to facilitate complex assembly and transcription initiation. The encoded protein is structurally similar to one of the histone-like TAFs, TAF5. Alternatively spliced transcript variants encoding different isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]

Retrocopy(s) from TAF5L

Retroname Coord Strand Genomic Region ENSG
TAF5LP1 chr17:35498051-35500291 + Intragenic
ENSG00000267369 UCSC

Expression

Transcript Sequences

>NM_001025247.2
ATTGGCGGAGACGGTTGCGCGTTGGAGGCCCGAGCGGCCCAGCCCGCGGCCCGCTCCGTGTCAGTCAGTCATGGAGCGGCCGCCCAGAGCGGCGGCGGGGGCGGCGGGGCGCGGGGCGCGGGGGCCCAGCTGAGCCGGCCGTCGGAGTGAGACCCTGCGGCAGAGACGACGGAGGCGGAAGCAACCCGATCCCGGAGGCGGCGGCGGCGGGGGGAGCCGGAGCCGCCTGGGATGTTCAGTCATGAAACGAGTGCGTACCGAGCAGATTCAGATGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTACGTGGACTCAGATGGTCCCCTGAAGCAAGGACTGCGGCTGTCACAGACTGCTGAAGAGATGGCGGCCAATCTAACAGTGCAATCAGAATCTGGTTGTGCCAACATAGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTTGGACGACTGCGGAATTTTCTCACTGATTCTGATTCCCAGCATAGCCACGAAGTGATGCCTCTCCTCTATCCTCTCTTTGTCTACCTCCATCTCAACCTGGTCCAAAACAGTCCGAAGAGCACAGTGGAAAGTTTTTACAGCCGCTTCCATGGAATGTTTCTGCAGAATGCTAGCCAGAAGGATGTCATTGAGCAGCTACAGACCACTCAAACCATCCAGGACATCCTATCTAACTTCAAGCTTCGAGCATTCCTAGATAACAAGTACGTGGTCCGTCTCCAAGAAGACAGCTACAACTACCTTATCCGCTACCTCCAAAGTGACAACAATACTGCCCTGTGCAAAGTCCTCACCTTACATATTCATCTTGACGTGCAGCCTGCCAAGAGAACAGACTATCAGCTGTATGCCAGTGGCAGCTCCTCCCGCAGTGAGAACAACGGTTTGGAGCCCCCCGACATGCCCAGCCCTATTCTGCAGAACGAGGCTGCCCTAGAGGTCTTACAGGAGAGCATTAAGCGAGTCAAGGATGGGCCTCCCTCCCTCACTACCATCTGCTTCTATGCCTTCTATAACACAGAGCAGCTGTTGAACACTGCAGAAATCTCCCCCGATAGCAAGCTGCTTGCTGCTGGGTTTGACAACTCCTGTATAAAACTTTGGAGTTTACGATCCAAGAAGTTAAAATCAGAGCCCCACCAAGTAGACGTGTCCCGCATCCATTTGGCTTGTGATATTCTGGAGGAGGAGGTATGAATACCATTTTTTTCTTCCCTGCACCCGCCTTCCTAATTTCCTTAGAATGTCCTTACCAAACACGACATATCTTAGAATGGACTTCCTAGTTTCCCTCATCATATAGCTAAAGCCAGACTAATGACATGTTACCTGTAGCCATTGAATTCCTGCACATGCCTAACCTAAGATGCAAAAACAATTTTTAGCAGCATTAACTTCTTATTAATGAATGGTCAGTATTTATACTATGTGAAATGTGGATAGCAACACTAAGCCTAATGAAAGACCTTTAGCTAATATTGACTTTAGCTGAGATTTGCAGTAAATATACACTTATGTGTGTGCACatttgctcaggtacaaataatcggtagtaggataactgagtcgaagggcctccattgtcaactgtaatgaatattattttccccacagaaggttgtgccatttcacagtctcagcaacagtagtaagaatactggcatccctgcaccctcaccacactggatGGATGGTATTGGCTTTCTGAGGCCAGTGCATATCCTGTGGCTCCATGTACCCCGGGGTGTTCCCAGACCCCACTTGGAGAAGTAACACAGGAAGTAGAGTTGCCAGCTCCCCTCCCCCCGTCAGTCAGTGTTCAATCTTGTTTGGCTTGTAACCGTTTAGGACAGTCATTGAAAAGGGCAGGCGCAGCTTGGGTTTCAGGTCACCAAAAATCACTACCTTAGAAAAAATGTGGGCCAAGGAAGATAGAAATTAAACTTCACAGCATTAACTTTTCTTTAGAGTGGTCCTGAAAAAGCTGTGGGCCAAAGTATTTTTGTCTTATCACCACTGAAATTCAGGTAGCTCTGCCTCACATTACTTTGGATGGAAAATTCTTTACACAATGTTGAATAATTAAGGAGCAAAAAAATCACTCTAATTAAATTACAGTTAATGATAAGGATGTCAAGAATATTGGGTGCCCTAAATTAAACCATTGTTTTCCTGTTCCTGTTTTCTGAGTCCACTTCCAGTTAGGATGGCCTTTGAATTTTTGATTCTTGCAACCGAGACAGTATAATTGAAGGATTTCCTTGTGATGAGTGAAGAGTCTAGATTCCCATGTAGAAGCTTTAATTTCTAGAATTTTATAGTACTCTCCAAAATATTTTTTATTACATTTGTATTTGAATTTTCAAACATCTCTTTTCCTTGGAGACAGTTCCCTTTTTGGGAGTTCTTCTGATAAAACTGAGGAATACTGCCTGCATTTGCTTTCGATTTTCTGTAAATACAAAAAAAAATTACACTGACCTTATTAGCTTTGATGATACAGAGTTTGGAGATTATTCTGTGCATTAAAAATTAATATTAAAGAAGATAGCATTATGACATCTGATAACAGTAGACCAAAATAAAACATTTTAAGACTCTGGCCACTACTGGTAACTAGCTCTGTGGCTTGTCCTATGTTTATTTCCGGGTATCAGAAGTGTATCTGAAGACTCAGAAGTGAGGAACCGCATGCGGAATTCCAGGAACTGAAAGAAATTAAGTATGGCTGGAGTTAGGAGAGGGGCCAAGACAGGAAGTGATGTAGTGACACTGTCTTATATGAGCAATTATGGCGGCCAAACTAGGGTAGTGGCAGTGGCAAAGGAGACATGGATGGACTAGAGAAGAGCTCGGTTATTCAATTACTGTAGGGGATAAGGGAGAGCAAGCATCAAGGGTGACGTTTGTGTTTCAGGCTTAAACAGTTGGATGTCCATCAAGAAGAAAGCAAAAGACGTCATTGGAATGGTGGTTTTGTTTAAGCATTTCTGGCTTTCCATCATGGTTCATACTGAAAGTACTGTAGATGCTAGCTAACCTCTGCCCTTTTTAAGAATAAACCTTTTTTTTAAACTTAAGAACTAAAGCTGAGATTCTCCTATTCTGTTGTTGAGGGGCTTCCTGCATGCCCGCCCATTTTATCACAGCAATTTGAGAAGTTTTCTTTTTGGTTTCTGACAACAAGCATTTGGGGAGAAAGCCAGGCATAAATTAGTTACGATAGTTGGTGTTTAATGTTTCTCCAGTGAAAATTTGGACTTTTCTTTTTCCCTTATAGAATGCATAATTAAAACAGACTATTATTTTGAAATGAAATATTGAATATTAAAAAAAATAAAATAGAGACTCTTAATACAGGAGCCACAAACTCACATACCTAGAGAAACCAAACAGGTAAAAGCAAGTGGTGAAGCCACATGGATTAATGAGATGATAGAAAGTACAAAATCACTATGTAAGTCAGATTAAAAAGCCAGCTTGCACTCTCTGCTTTCATCTTTTTGAAGCAATAACTATTACATAAATCAGTGAATACAGTATTTCTACAGTATTTGAAACGGTGTTCACacccagcaattccacttctagacatatatccaagagaatggaaaacatgtgcacacaggcacttgtacatgaatatttatggaagcattattcacaatagccaaaaagtggaaacagtccaaatggccatcaagatgaatgaataaataaaatgtagtgtgtgcatgcagtggaatattatttgcccataaaaagaaatgaagcactgatgcaggctgcaacatggatgaacttgaaagctttatgctacgtgaaagaagccagtcataaaaggtcacctactgttattcctttcataggaaatatccagataggcaagtccatagagacagagaggagaggagtggttgccaggggctgggcaaggagaatgagagtgaccgctaatgggtgtggcatttctttgtgaggtaatgaaaatgttctgtattagatagtggtgatcattgcacaactctgtgaatgtactaaaaatcattgaattgtacactttgaaagaattatatagtatgtaattatatctcagtTTAAAAAAAAAAACAGGATAACAGTAACCAAAATCTTCTATGTAAGCTTAAAATTTTCTCTGTTAATTATGCCAAATAAAACTGAATTCACAGCA