Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl7a
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L7A
Also known as Surf3
Coordinate chr2:26800697-26803324
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in maturation of LSU-rRNA. Located in membrane and polysomal ribosome. Is active in synapse. Is expressed in embryo. Orthologous to human RPL7A (ribosomal protein L7a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl7a

Retroname Coord Strand Genomic Region ENSG
Rpl7aP3 chr1:25263028-25263520 + Intragenic
ENSMUSG00000080849 UCSC
Rpl7aP4 chr1:55159214-55160051 - Intergenic
ENSMUSG00000100736 UCSC
Rpl7aP5 chr1:75613021-75613865 + Intergenic
ENSMUSG00000082012 UCSC
Rpl7aP6 chr1:89183864-89184722 - Intergenic
ENSMUSG00000102083 UCSC
Rpl7aP1 chr1:133457496-133458048 + Intergenic
ENSMUSG00000101004 UCSC
Rpl7aP2 chr1:152004323-152005183 + Intergenic
ENSMUSG00000102090 UCSC
Rpl7aP35 chr10:86836002-86836517 + Intragenic
ENSMUSG00000089666 UCSC
Rpl7aP32 chr10:120764079-120764920 + Intragenic
ENSMUSG00000082936 UCSC
Rpl7aP33 chr10:126728962-126729821 + Intragenic
ENSMUSG00000112423 UCSC
Rpl7aP38 chr11:6735795-6736510 - Intergenic
ENSMUSG00000082579 UCSC
Rpl7aP36 chr11:35683606-35684296 - Intergenic
ENSMUSG00000082688 UCSC
Rpl7aP37 chr11:61021325-61022151 - Intragenic
ENSMUSG00000080912 UCSC
Rpl7aP40 chr12:59401558-59402414 - Intergenic
ENSMUSG00000111978 UCSC
Rpl7aP41 chr12:64923559-64924406 - Intergenic
ENSMUSG00000113075 UCSC
Rpl7aP42 chr12:96259174-96259877 + Intergenic
ENSMUSG00000112658 UCSC
Rpl7aP39 chr12:115554026-115554754 + Intergenic
ENSMUSG00000106283 UCSC
Rpl7aP43 chr14:57673131-57673978 - Intragenic
ENSMUSG00000081238 UCSC
Rpl7aP44 chr15:13840442-13840616 + Intergenic
ENSMUSG00000115824 UCSC
Rpl7aP45 chr15:56646037-56646832 - Intergenic
ENSMUSG00000115493 UCSC
Rpl7aP46 chr15:90842200-90842918 + Intragenic
ENSMUSG00000116113 UCSC
Rpl7aP48 chr16:53439847-53440426 - Intergenic
ENSMUSG00000116629 UCSC
Rpl7aP49 chr16:57717123-57717966 - Intergenic
ENSMUSG00000116630 UCSC
Rpl7aP50 chr16:88806501-88806862 - Intergenic
ENSMUSG00000116708 UCSC
Rpl7aP51 chr16:89995284-89995591 + Intergenic
ENSMUSG00000116829 UCSC
Rpl7aP52 chr17:15162207-15162985 + Intragenic
ENSMUSG00000092577 UCSC
Rpl7aP53 chr17:24109088-24112579 - Intergenic
ENSMUSG00000117527 UCSC
Rpl7aP54 chr17:71264099-71264957 + Intergenic
ENSMUSG00000117200 UCSC
Rpl7aP55 chr17:73922673-73923320 - Intragenic
ENSMUSG00000117228 UCSC
Rpl7aP56 chr18:25956586-25957433 - Intergenic
ENSMUSG00000087121 UCSC
Rpl7aP57 chr18:41610728-41610947 - Intergenic
ENSMUSG00000118299 UCSC
Rpl7aP58 chr18:80897149-80897984 + Intragenic
ENSMUSG00000114756 UCSC
Rpl7aP61 chr19:3366736-3367605 - Intergenic
ENSMUSG00000118213 UCSC
Rpl7aP59 chr19:25323730-25324587 - Intragenic
ENSMUSG00000118238 UCSC
Rpl7aP60 chr19:27490019-27490726 + Intergenic
ENSMUSG00000118072 UCSC
Rpl7aP62 chr19:59169079-59169796 + Intergenic
ENSMUSG00000117834 UCSC
Rpl7aP8 chr2:3680796-3681320 - Intergenic
ENSMUSG00000080703 UCSC
Rpl7aP9 chr2:77792563-77793417 - Intergenic
ENSMUSG00000081719 UCSC
Rpl7aP7 chr2:154611132-154611657 - Intergenic
ENSMUSG00000098640 UCSC
Rpl7aP13 chr3:53928585-53929207 + Intergenic
ENSMUSG00000103155 UCSC
Rpl7aP14 chr3:65936918-65937395 - Intergenic
ENSMUSG00000103369 UCSC
Rpl7aP15 chr3:82484979-82485381 + Intergenic
ENSMUSG00000102514 UCSC
Rpl7aP10 chr3:116792463-116793237 - Intergenic
ENSMUSG00000105221 UCSC
Rpl7aP11 chr3:138285499-138286046 - Intergenic
ENSMUSG00000106353 UCSC
Rpl7aP12 chr3:151859082-151859622 + Intragenic
ENSMUSG00000084343 UCSC
Rpl7aP16 chr4:59090348-59090971 + Intragenic
ENSMUSG00000081432 UCSC
Rpl7aP18 chr5:72190063-72190841 - Intragenic
ENSMUSG00000080736 UCSC
Rpl7aP19 chr6:34763684-34764440 + Intragenic
ENSMUSG00000082920 UCSC
Rpl7aP20 chr6:42496414-42497254 - Intergenic
ENSMUSG00000078177 UCSC
Rpl7aP21 chr6:43833015-43833857 - Intergenic
ENSMUSG00000107920 UCSC
Rpl7aP23 chr6:68711164-68711645 - Intergenic
ENSMUSG00000106309 UCSC
Rpl7aP24 chr6:71846153-71846936 - Intragenic
ENSMUSG00000108681 UCSC
Rpl7aP26 chr7:4641515-4642368 + Intragenic
ENSMUSG00000108571 UCSC
Rpl7aP25 chr7:13173385-13174023 - Intergenic
ENSMUSG00000107945 UCSC
Rpl7aP27 chr7:74536116-74536670 + Intragenic
ENSMUSG00000108716 UCSC
Rpl7aP28 chr7:81095648-81096478 + Intragenic
ENSMUSG00000081747 UCSC
Rpl7aP29 chr8:124732218-124732817 + Intragenic
Intragenic
ENSMUSG00000110612 UCSC
Rpl7aP30 chr9:22391234-22391796 - Intragenic
ENSMUSG00000090067 UCSC
Rpl7aP31 chr9:23687812-23688324 + Intergenic
ENSMUSG00000111041 UCSC
Rpl7aP64 chrX:42500919-42501620 - Intragenic
ENSMUSG00000081300 UCSC
Rpl7aP65 chrX:66769847-66770413 + Intergenic
ENSMUSG00000082621 UCSC
Rpl7aP66 chrX:87941261-87941995 - Intergenic
ENSMUSG00000082847 UCSC
Rpl7aP67 chrX:93590644-93591341 - Intergenic
ENSMUSG00000081796 UCSC
Rpl7aP63 chrX:151691725-151692471 - Intergenic
ENSMUSG00000083440 UCSC
Rpl7aP47 chr16:4048146-4049005 + Intergenic
ENSMUSG00000089645 UCSC
Rpl7aP17 chr4:85839345-85840053 - Intragenic
N/A UCSC
Rpl7aP22 chr6:57927059-57927454 + Intragenic
N/A UCSC
Rpl7aP34 chr10:16924726-16925271 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_013721.3
tttctccagcagCCGAGCAAGATGCCCAAAGGGaagaaggccaaggggaagaaggtggccccGGCCCCCGCCGTCgtcaagaagcaggaggccaAGAAGGTGGTCAACCCTCTGTTCGAGAAGAGGCCCAAGAACTTCGGCATTGGAcaggacatccagcccaaaagagattTAACGCGCTTCGTCAAATGGCCCCGCTACATCAGACTGCAGCGGCAAAGAGCTATCCTCTACAAGCGGCTCAAAGtccctcctgccattaaccagttcacccaggccctggacaggcagacagctactcagctgcttaagcttgcccacaagtacaggccagagacaaagcaagagaagaagcaaaggctactggcccgtgctgagaagaaagctgctggcaaaggcgACGTCCCAACTAAGAGACCACCTGTCCTCCGAGCAGgagtcaatacagtcaccaccttggtggagaacaagaaggctcagctggtggtgattgcccatgacGTAGACCCCATTGAGCTGGTGGTTTTCCTACCTGCTCTGTGTCGAAAGATGGGggtgccctactgcatcatcaagggaaaggccaggctggggcacctggtccacaggaagacatgcaccaccgttgccttcacacaggttaactcggaagacaagggtgctctggctaagctggtggaagctattaggaccaattataatgacagatatgacGAGATCCGTCGCCACTGGGGAGGCAAcgtcctgggtcctaagtctgtggctcgaattgccaagctggaaaaagcaaaggctaaagaactcgcCACTAAATTGGGTTAAATGTACACTAAATTTTCTGTacctaaatataattacaaaatt