Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps11
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S11
Also known as -
Coordinate chr7:44771812-44773813
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytosolic ribosome. Predicted to be part of cytosolic small ribosomal subunit. Is expressed in cerebral cortex subventricular zone; cerebral cortex ventricular layer; cortical plate; and pancreas epithelium. Orthologous to human RPS11 (ribosomal protein S11). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps11

Retroname Coord Strand Genomic Region ENSG
Rps11P1 chr1:192570858-192571399 + Intragenic
ENSMUSG00000102162 UCSC
Rps11P15 chr11:54838254-54838648 + Intragenic
ENSMUSG00000082180 UCSC
Rps11P14 chr11:116273532-116274076 + Intragenic
ENSMUSG00000081929 UCSC
Rps11P17 chr12:51344269-51344792 + Intergenic
ENSMUSG00000046620 UCSC
Rps11P18 chr13:101485204-101485735 + Intergenic
ENSMUSG00000114295 UCSC
Rps11P19 chr14:122068357-122068920 + Intergenic
ENSMUSG00000115443 UCSC
Rps11P21 chr18:74533782-74534166 + Intergenic
ENSMUSG00000117898 UCSC
Rps11P2 chr3:23429086-23429337 - Intergenic
ENSMUSG00000102214 UCSC
Rps11P3 chr3:57625186-57625737 - Intergenic
ENSMUSG00000104623 UCSC
Rps11P4 chr4:10946578-10947117 + Intergenic
ENSMUSG00000081715 UCSC
Rps11P7 chr6:24594933-24595281 + Intergenic
ENSMUSG00000107189 UCSC
Rps11P8 chr6:46755293-46755848 - Intragenic
ENSMUSG00000107532 UCSC
Rps11P10 chr7:63460527-63461131 - Intergenic
ENSMUSG00000108700 UCSC
Rps11P12 chr7:96084710-96085285 - Intragenic
ENSMUSG00000082780 UCSC
Rps11P13 chr9:59378994-59379542 - Intragenic
Intragenic
ENSMUSG00000090516 UCSC
Rps11P5 chr4:98034334-98034867 - Intergenic
N/A UCSC
Rps11P6 chr5:135923766-135923910 + Intergenic
N/A UCSC
Rps11P9 chr6:91859237-91859435 - Intragenic
N/A UCSC
Rps11P11 chr7:87998472-87999022 - Intergenic
N/A UCSC
Rps11P16 chr12:4509596-4510085 + Intergenic
N/A UCSC
Rps11P20 chr14:70190901-70191413 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_013725.4
ACTTCCGCCCCGACCTCGCGTGGTGAATAAGGAAGCCGGGAGCGGCCCTGCCTCTCCCTTTCTCCGGCGGCCGGGAAGATGGCGGACATTCAGACGGAGCGTGCTTACCAAAAGCAGCCTACGATCTTTCAAAACAAGAAGCGGGTTCTGCTGGGAGAAACCGGCAAGGAAAAACTCCCTCGGTACTACAAGAATATCGGTCTAGGCTTCAAGACGCCTAAAGAGGCTATTGAGGGTACCTACATAGACAAGAAATGCCCCTTCACTGGTAACGTCTCCATCCGAGGTCGGATCCTGTCTGGTGTCGTGACGAAGATGAAGATGCAGAGGACCATTGTCATCCGCCGGGACTATCTCCATTACATCCGAAAGTACAATCGCTTTGAGAAGCGTCACAAGAACATGTCTGTGCACCTGTCCCCCTGTTTCAGGGATGTACAGATCGGAGACATTGTCACAGTTGGAGAGTGCAGGCCCCTGAGCAAGACTGTGCGATTCAATGTGCTCAAGGTCACCAAGGCTGCTGGCACCAAGAAGCAGTTTCAGAAGTTCTAAGGGGACTCTGGCCAATGCCCTAGaacaaataaagttattttcCAACG