Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Txnl4a
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name thioredoxin-like 4A
Also known as D18Wsu98e|Dim1|Txnl4|U5-15kD|U5-15kDa
Coordinate chr18:80250041-80269066
Strand +
Gene summary Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in cytosol; nuclear membrane; and nucleoplasm. Predicted to be part of U2-type precatalytic spliceosome; U4/U6 x U5 tri-snRNP complex; and U5 snRNP. Is expressed in several structures, including brain ventricular layer; submandibular gland primordium; thymus primordium; tooth; and trigeminal ganglion. Human ortholog(s) of this gene implicated in Burn-McKeown syndrome. Orthologous to human TXNL4A (thioredoxin like 4A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Txnl4a

Retroname Coord Strand Genomic Region ENSG
Txnl4aP1 chr1:19107489-19108550 + Intergenic
 ENSMUSG00000101644 UCSC
Txnl4aP2 chr3:12449268-12449575 - Intergenic
 ENSMUSG00000103339 UCSC
Txnl4aP3 chr17:53558333-53558500 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001384173.1
GTCAGCGCGTGACGGCGCGGGAGGAGCTGGTGCTGGGTGGAGGACGCGGTGTTTGGGCCGCGTGGGCTCACACGAGGTTAGAGGTCGTCTGGTGTGGCCCCATGGGGCAGGGGCTGCCGGGGTGTGTTCCCTGCGGAGGTGGCGATTCGAGGGTGTGGTTCCCGTGCGAGCCGAGGCCCTGTATGGGCTTTGGGCCCGGGGCGAGCAGTGGAGGTTTGGGGTGCGGTGGCCTGCAGGTAGCTCGCGGCGTCCGGCCGCGCAGGCGCGCTCAAGATGTCGTACATGCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATCCTTTCGGAGGAGGACCGCGTGGTCGTCATTCGTTTCGGACACGACTGGGACCCCACTTGCATGAAGATGGACGAGGTTCTGTACAGCATCGCCGAAAAGGTTAAAAATTTTGCAGTTATTTATCTTGTGGATATTACAGAAGTGCCTGACTTCAACAAGATGTACGAGCTGTATGACCCCTGCACTGTCATGTTCTTCTTCAGaaaCAAACATATCATGATTGATTTGGGCACTGGCAACAACAACAAGATCAACTGGGCCATGGAAGACAAGCAAGAAATGGTTGACATCATAGAGACCGTGTACCGTGGCGCCCGCAAAGGCCGGGGTCTGGTGGTGTCTCCCAAGGACTATTCTACCAAGTACAGATACTGAGCCCTGCCCTCAGGCTGTGCAAAGGACACTGAGAGCCTCTTCCACATAGAAATACTCTGCTCTCGTAGCCTCTGGAAAGGCCCTGCAGCCCGACATTGCTGTAGAGCTGGAGGATCCGTGAGATGAGGGCTACAGAGCCTTAGCTAGCTGGAGCAAATAAACATGGCGAGGGAGCAGTGGGGATCTGCTGTGCTTACTGCGTGCAAATGTCTTTACTCCCAGTGTTTGTCCCAGGAGGCTGTCTGGTTTTGCATCTTCGAGCGGTTGCCAGAGCTGTCAAGCAAACTACCCCAGACATTTTAGCTGGACAGTTCTCGAGGTGTGAGCCTGAGGCGGCTGGGTTCTGGATTCCATTTGAGGCTGTGGGCCATCTGCAGCAGCCCCTTGGTTCTGGAGGTTGTTGGCCATCCTTGGTAAACCTTGGATTGGGCACACGTTATCCCAGTCTTTGCCGTTTTCCTTACAAGTCATGTGTATCATGTGTATGTCAATCTCAAAACATACCCTACTTACAAACACCAGTTACCTTGCCTGGGGCCACCTCACCTCTGTACAGCCTCATCTTAACCGATTACGTATGATAGTCACTCCAAATGAGGTCATGGTCTGAGATTCTGGGCTTAAACCATCAACATATTAATTTGGGGTGACATAACCCATAAGAATACCCAGTCTTAATCTCTCTCAGCATATAAAACAGCACTGTGATCCAGGTAGGATTCACTCCTGCTGCTGGCTGAGGCCAGGCAGCCGAGCTCAAAACACAACTACGAAAAAGCAATTGCCTGGCGGCGCTTCCCTTCCTCCACTCTTCCTCACAGCATGTCTGTGTCCTGCTTCCTAAGGAAGCAGGGTCCTCATTCCACCCAGCACAAGTCCCCTTATCTACGTCAGCTTcctcttgtttcttctcttcctggcaATGTGGAGGGACCCGGGTCTACCCTCTCATCTCTAAACACAAACTCAGAAGAGAAAGATGAGCATACCAGGAGCCGACTCTGGACGAGCGCCTCAGTACCCCTGCCCCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTGGTGGGTGGACAGTACCTTCTGTTGTTCACACACTGACCCATTAGGAAAGCTCAGGAGTGAAGCAGATGTCTGACCTACAAATAAACGCACTCGTCAGATGAACCAAAACATGAGTCCTGGCTTGGGGTGCCGCTTGGTGATAGAGGTAGTATTCAGTTCCTAGCTTGCAAAAAGTCAGATTCACATGCAGAGCTGCAATGTAACGCCTAGCACTAATTTGCTCATTAAAAGAATAGTagaagccggacgtggtggcgcatgcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggctacacagagataccctgtctcgaaaaaccaaaaaagaaaaaaaaagaatagtagaGCCAAacatggtggtgcgtgcctttaattaacaccagcacgtgggaggcagaagtaggcagatctctggttttgaggccagtctgctggTTATCTGGCTtatatagtgagacactgtcaggGGGAAAAAAGTTTAGCTTTCCTCATTGGCCATTGGCTGGTCCCATGTGGAGTTGCTCTTGAGTCCCCACATAAGGGAAACTCAGTGTCTGGAGCCCTCAAGAATGTCCTTAAATCCGATGTGACAGGAGAACACTGGTACAACCTTGCTCTGTACATCTACTGAAGGAAAAGTAATGTGTGTACATCACTAATGTGAGAGGACctgcatgtcttagttagggtttcattgctgtgaagagacaccatgaccaaggcaactctgtaacatttacttggggctggcttacaatttcagaggttcagtccattaccagcatggcaggaagcatggcagcgtgttGGCAGGcatggttctggagaaggagctgagagttctacatctagatcagAAGTCAGCCAGGATCAGACTCTCTCTGCAGGCATCCAGGAGGATGAGACATCTGTATTGGGTGGAACCTGAGCATGGGAgcctcaaggcccacccccacagtgacggacttcctctaacaagggcACGCCTACCCCAAcgaggccacacttcctaactgTGCCACTTCCCCTgggccaggcatattcaaaccaccccatGGGGAAAGCTACTGCTAGCTGGTCGAGCTGAGTCGGCTTTAAGTTGACGCTGGTATCAATGTGGCCTGTGCTGAGGTTTGCTGCTGCCACTGAGCAGCTTCATTCCTGGGACCTTCACTAACTTGATCCAAGGAGCCTTCCAGGAACCACTTCTGGTGTCGATCTGATGGTGATGGATACCAGGGCTGACCGAAAGCTTCTTCCCAGAGGCGTTTCCTGTCAACCTGCCTACCATTGCTCTGTGTAACAGATTGTCTGCACAAGGTAGACAGAGCCATTTTCATGCAGGAAACGAGCTCCCTGGAGGGGTCTAGTGTGGCCTGTGAGCAATGTGGGAGGCCATGCCTGATGTCTACAGAGATCctgaagatggagaaagaagaggcTGCCCCAGAGAAGGCTGTGACCAAGGAGGAACTGCAGGAAGAATGGACTGCGCCAGTGCCTGAGTTCGCTGCTGCTCAGGAAGGGGTTGGCAGACTGGTCTGAGTGGTCAGGTGCCCTTCCTGCCTGTCTGGCAGAGCCTTACTCAAGACTGGAGTGGCAGCCTCCGAGGGCTGGACTGCAGCTCCCACTGGCCAGCCACTGAATGGAAACCAACAGCTACCAAGGTCACAGAAAGGTTAGCAACTGTGCGGTCTTATTTTTATGGGGGTAAAGCCCTGCAGAGTGAGATCTCTTAAGACCCAGAGTCCACAGTGCTTGCAGTCTGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGTTGACCATTGCTAGGGATTAGAGccatggctctcaaccttcctaatgctgtgaccctttagtagAGTTCTTCAAGATGTGGTGACACCCAAGCATAACATTTTGTTACTacttgtcctggctggttttgtgtgccaacttgacacaagctggagttatcatcacagagaaaggagcttcagttggggaagtgcctccatgagatccagctgtggggcattttctcagttggtgatcaaggggggagggcccattgtaggtggtgccatccctgggctggtagtcttgggttctataagaaagcaagctgagcaagccaggggaaacaagccagtaaagaccatccctccatggcctctgcatcagctcttgcttcctgacctgcttgagttccaggcctgactttgAGAAATTGGAGTCGTCCGAAGTTGCTGGTGAGGCTATCTCGCAAAGTTCAATATGTTATCATAGCTGGCACTCCTAGGTATAGACCCAAgagaacagcaatgtagaagtgtaagctgaataaaccctttcctccccaa
>NM_025299.4
GTCAGCGCGTGACGGCGCGGGAGGAGCTGGTGCTGGGTGGAGGACGCGGTGTTTGGGCCGCGTGGGCTCACACGAGGTAGCTCGCGGCGTCCGGCCGCGCAGGCGCGCTCAAGATGTCGTACATGCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATCCTTTCGGAGGAGGACCGCGTGGTCGTCATTCGTTTCGGACACGACTGGGACCCCACTTGCATGAAGATGGACGAGGTTCTGTACAGCATCGCCGAAAAGGTTAAAAATTTTGCAGTTATTTATCTTGTGGATATTACAGAAGTGCCTGACTTCAACAAGATGTACGAGCTGTATGACCCCTGCACTGTCATGTTCTTCTTCAGaaaCAAACATATCATGATTGATTTGGGCACTGGCAACAACAACAAGATCAACTGGGCCATGGAAGACAAGCAAGAAATGGTTGACATCATAGAGACCGTGTACCGTGGCGCCCGCAAAGGCCGGGGTCTGGTGGTGTCTCCCAAGGACTATTCTACCAAGTACAGATACTGAGCCCTGCCCTCAGGCTGTGCAAAGGACACTGAGAGCCTCTTCCACATAGAAATACTCTGCTCTCGTAGCCTCTGGAAAGGCCCTGCAGCCCGACATTGCTGTAGAGCTGGAGGATCCGTGAGATGAGGGCTACAGAGCCTTAGCTAGCTGGAGCAAATAAACATGGCGAGGGAGCAGTGGGGATCTGCTGTGCTTACTGCGTGCAAATGTCTTTACTCCCAGTGTTTGTCCCAGGAGGCTGTCTGGTTTTGCATCTTCGAGCGGTTGCCAGAGCTGTCAAGCAAACTACCCCAGACATTTTAGCTGGACAGTTCTCGAGGTGTGAGCCTGAGGCGGCTGGGTTCTGGATTCCATTTGAGGCTGTGGGCCATCTGCAGCAGCCCCTTGGTTCTGGAGGTTGTTGGCCATCCTTGGTAAACCTTGGATTGGGCACACGTTATCCCAGTCTTTGCCGTTTTCCTTACAAGTCATGTGTATCATGTGTATGTCAATCTCAAAACATACCCTACTTACAAACACCAGTTACCTTGCCTGGGGCCACCTCACCTCTGTACAGCCTCATCTTAACCGATTACGTATGATAGTCACTCCAAATGAGGTCATGGTCTGAGATTCTGGGCTTAAACCATCAACATATTAATTTGGGGTGACATAACCCATAAGAATACCCAGTCTTAATCTCTCTCAGCATATAAAACAGCACTGTGATCCAGGTAGGATTCACTCCTGCTGCTGGCTGAGGCCAGGCAGCCGAGCTCAAAACACAACTACGAAAAAGCAATTGCCTGGCGGCGCTTCCCTTCCTCCACTCTTCCTCACAGCATGTCTGTGTCCTGCTTCCTAAGGAAGCAGGGTCCTCATTCCACCCAGCACAAGTCCCCTTATCTACGTCAGCTTcctcttgtttcttctcttcctggcaATGTGGAGGGACCCGGGTCTACCCTCTCATCTCTAAACACAAACTCAGAAGAGAAAGATGAGCATACCAGGAGCCGACTCTGGACGAGCGCCTCAGTACCCCTGCCCCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTGGTGGGTGGACAGTACCTTCTGTTGTTCACACACTGACCCATTAGGAAAGCTCAGGAGTGAAGCAGATGTCTGACCTACAAATAAACGCACTCGTCAGATGAACCAAAACATGAGTCCTGGCTTGGGGTGCCGCTTGGTGATAGAGGTAGTATTCAGTTCCTAGCTTGCAAAAAGTCAGATTCACATGCAGAGCTGCAATGTAACGCCTAGCACTAATTTGCTCATTAAAAGAATAGTagaagccggacgtggtggcgcatgcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggctacacagagataccctgtctcgaaaaaccaaaaaagaaaaaaaaagaatagtagaGCCAAacatggtggtgcgtgcctttaattaacaccagcacgtgggaggcagaagtaggcagatctctggttttgaggccagtctgctggTTATCTGGCTtatatagtgagacactgtcaggGGGAAAAAAGTTTAGCTTTCCTCATTGGCCATTGGCTGGTCCCATGTGGAGTTGCTCTTGAGTCCCCACATAAGGGAAACTCAGTGTCTGGAGCCCTCAAGAATGTCCTTAAATCCGATGTGACAGGAGAACACTGGTACAACCTTGCTCTGTACATCTACTGAAGGAAAAGTAATGTGTGTACATCACTAATGTGAGAGGACctgcatgtcttagttagggtttcattgctgtgaagagacaccatgaccaaggcaactctgtaacatttacttggggctggcttacaatttcagaggttcagtccattaccagcatggcaggaagcatggcagcgtgttGGCAGGcatggttctggagaaggagctgagagttctacatctagatcagAAGTCAGCCAGGATCAGACTCTCTCTGCAGGCATCCAGGAGGATGAGACATCTGTATTGGGTGGAACCTGAGCATGGGAgcctcaaggcccacccccacagtgacggacttcctctaacaagggcACGCCTACCCCAAcgaggccacacttcctaactgTGCCACTTCCCCTgggccaggcatattcaaaccaccccatGGGGAAAGCTACTGCTAGCTGGTCGAGCTGAGTCGGCTTTAAGTTGACGCTGGTATCAATGTGGCCTGTGCTGAGGTTTGCTGCTGCCACTGAGCAGCTTCATTCCTGGGACCTTCACTAACTTGATCCAAGGAGCCTTCCAGGAACCACTTCTGGTGTCGATCTGATGGTGATGGATACCAGGGCTGACCGAAAGCTTCTTCCCAGAGGCGTTTCCTGTCAACCTGCCTACCATTGCTCTGTGTAACAGATTGTCTGCACAAGGTAGACAGAGCCATTTTCATGCAGGAAACGAGCTCCCTGGAGGGGTCTAGTGTGGCCTGTGAGCAATGTGGGAGGCCATGCCTGATGTCTACAGAGATCctgaagatggagaaagaagaggcTGCCCCAGAGAAGGCTGTGACCAAGGAGGAACTGCAGGAAGAATGGACTGCGCCAGTGCCTGAGTTCGCTGCTGCTCAGGAAGGGGTTGGCAGACTGGTCTGAGTGGTCAGGTGCCCTTCCTGCCTGTCTGGCAGAGCCTTACTCAAGACTGGAGTGGCAGCCTCCGAGGGCTGGACTGCAGCTCCCACTGGCCAGCCACTGAATGGAAACCAACAGCTACCAAGGTCACAGAAAGGTTAGCAACTGTGCGGTCTTATTTTTATGGGGGTAAAGCCCTGCAGAGTGAGATCTCTTAAGACCCAGAGTCCACAGTGCTTGCAGTCTGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGTTGACCATTGCTAGGGATTAGAGccatggctctcaaccttcctaatgctgtgaccctttagtagAGTTCTTCAAGATGTGGTGACACCCAAGCATAACATTTTGTTACTacttgtcctggctggttttgtgtgccaacttgacacaagctggagttatcatcacagagaaaggagcttcagttggggaagtgcctccatgagatccagctgtggggcattttctcagttggtgatcaaggggggagggcccattgtaggtggtgccatccctgggctggtagtcttgggttctataagaaagcaagctgagcaagccaggggaaacaagccagtaaagaccatccctccatggcctctgcatcagctcttgcttcctgacctgcttgagttccaggcctgactttgAGAAATTGGAGTCGTCCGAAGTTGCTGGTGAGGCTATCTCGCAAAGTTCAATATGTTATCATAGCTGGCACTCCTAGGTATAGACCCAAgagaacagcaatgtagaagtgtaagctgaataaaccctttcctccccaa
>NM_178604.4
GTCAGCGCGTGACGGCGCGGGAGGAGCTGGTGCTGGGTGGAGGACGCGGTGTTTGGGCCGCGTGGGCTCACACGAGGTTAGAGGTCGTCTGGTGTGGCCCCATGGGGCAGGGGCTGCCGGGGTGTGTTCCCTGCGGAGGTGGCGATTCGAGGGTGTGGTTCCCGTGCGAGCCGAGGCCCTGTATGGGCTTTGGGCCCGGGGCGAGCAGTGGAGGTTTGGGGTGCGGTGGCCTGCAGGTAGCTCGCGGCGTCCGGCCGCGCAGGCGCGCTCAAGATGTCGTACATGCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATCCTTTCGGAGGAGGACCGCGTGGTCGTCATTCGTTTCGGACACGACTGGGACCCCACTTGCATGAAGATGGACGAGGTTCTGTACAGCATCGCCGAAAAGAAATGGAAGATAGTGGGAGATCTTCCTCATCTTGTATGAGTCCTGTTTGGATATCCCAGCTGTTTTAAAGCAAACGGTGCTGGTGTCGCTTGTGCTCTGAGGCATCCTCTGTGATTGTGTGGAGTCTGACAGGCCTGTCTGCCGCCAATATGAACATCCGCCGGGCTCGGCCAGATGACCTGATGAACATGCAGCACTGCAACCTGCTGTGCCTGCCCGAGAACTACCAGATGAAGTACTACTTCTATCATGGCCTCTCTTGGCCCCAGCTCTCCTACATTGCTGAGGACGAGGATGGGAAGATTGTGGGCTATGTCCTGGCCAAGATGGAGGAGGACCCCGATGATGTCCCTCACGGACACATCACCTCGCTGGCTGTGAAACGCTCCCACCGGCGCCTCGGCCTGGCCCAGAAGCTCATGGACCAGGCTTCCAGGGCCATGATTGAGAACTTCAGCGCTAAGTATGTATCCCTGCATGTCAGGAAGAGCAACCGGGCGGCTCTGCACCTGTATTCCAACACCCTGAACTTCCAGGTTAGCGAGGTGGAGCCCAAGTACTATGCAGATGGGGAAGACGCGTATGCTATGAAGCGAGATCTCTCGCAGATGGCCGATGAGCTGAGACGGCAGCTGGTGCTGAAGAAAGGCAGATATGTGGTTCTGGGCTCCAAGGAGAATCAGGGTAGCACACTTCCTGGTTCTGAAGAGGCCAGTCAGCAGGAGAACCTGGCCGGAGGTGACAGTGGTAGTGATGGCAAAGACAGCACTGATGTCCAAGACAGCTTGCAGACCCTAGGGTCCGCCTCCTAGAGCCTGCCTGCCTGAGCACTGCAGGTCCTTGTATTTTAGCCACATTGTTCTTGGGAACCTTGCTCTGTGGTCCCTGAATGGGACCTGAATGGCTCTCCTTTCAAAGCTTTAGCAGCAACCTTCTGCATAACCTGTGTGATCATGGAGGCACACCTAGACACAGAACCTGCTGTGCGGGAGTCAAGGAAGCCAGCCCGAGGACTGCCGTGCAGCCCTTTCTTGGCTTCTCCACGCTGCCGTCACATGCTGCTCAGTACTGTTCTGACTGTGTCCTGCAGCTTTCTGCTTGGAATGCCAAACAGGAAGTGGGGACAACTCGAGGTCCCCAGCTTCCAGCCTTTGcattatttatctgtttgtttgttttccttggaGTAGAATCATCAAGTACTGCCCTTGCTTTCTGTGGAAACTGCCCTGCCCGGCCCTCCCTCTTTTTGAAGAAGAATGGTCCCTTTCCTGAGGGAGAAGGTGATAGGTGTTAGACTAGTACACAAGCAGAATTTGTAGCTCTAAGGAAAGAACACGCAGAAATTAAATTGCATTCTCTaacctgaaaaaataaaaatataaaaagga