Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl3
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L3
Also known as F2|J1
Coordinate chr15:79961982-79967607
Strand -
Gene summary Predicted to enable 5S rRNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within cellular response to interleukin-4. Predicted to be located in cytosolic ribosome and nucleolus. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in early conceptus. Orthologous to human RPL3 (ribosomal protein L3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl3

Retroname Coord Strand Genomic Region ENSG
Rpl3P1 chr1:123684273-123685520 + Intragenic
ENSMUSG00000101985 UCSC
Rpl3P9 chr12:109793436-109794385 + Intergenic
ENSMUSG00000113711 UCSC
Rpl3P10 chr13:115665036-115666333 - Intergenic
ENSMUSG00000114551 UCSC
Rpl3P11 chr14:15049671-15050883 - Intergenic
ENSMUSG00000090618 UCSC
Rpl3P12 chr14:15777889-15779101 - Intergenic
ENSMUSG00000096927 UCSC
Rpl3P13 chr14:16901851-16903063 + Intergenic
ENSMUSG00000096286 UCSC
Rpl3P14 chr14:18592124-18593330 + Intergenic
ENSMUSG00000097594 UCSC
Rpl3P15 chr17:16946791-16947763 + Intergenic
ENSMUSG00000116944 UCSC
Rpl3P2 chr3:92134720-92136007 - Intergenic
ENSMUSG00000103286 UCSC
Rpl3P3 chr4:112812217-112813494 - Intergenic
ENSMUSG00000083011 UCSC
Rpl3P5 chr5:10608316-10609575 + Intergenic
ENSMUSG00000105536 UCSC
Rpl3P4 chr5:103099693-103099930 - Intragenic
ENSMUSG00000105253 UCSC
Rpl3P6 chr6:87741920-87743212 - Intergenic
ENSMUSG00000068262 UCSC
Rpl3P7 chr8:40471097-40471333 + Intergenic
ENSMUSG00000109815 UCSC
Rpl3P8 chr8:76001049-76002314 - Intragenic
ENSMUSG00000110515 UCSC
Rpl3P16 chrX:13068781-13070076 + Intergenic
ENSMUSG00000084349 UCSC
Rpl3P17 chrX:73214232-73215538 + Intergenic
ENSMUSG00000084131 UCSC

Expression

Transcript Sequences

>NM_013762.2
AGGGGGCGGAGCCATCACTTGGCTTTATATAGCCTGCACTGGCTCCTGGTCGCTCTCTATCTGCGGCGTGTGGCGGCGAGATGTCTCACAGGAAATTCTCAGCTCCCAGGCATGGGTCCTTGGGCTTCCTGCCTCGCAAGCGCAGCAGCCGGCATCGTGGGAAAGTGAAGAGCTTCCCTAAGGATGACGCTTCCAAGCCCGTTCACCTCACAGCCTTTCTGGGTTACAAGGCTGGCATGACCCACATCGTCCGGGAAGTTGACAGGCCAGGATCTAAGGTGAACAAGAAAGAAGTCGTGGAGGCTGTGACCATTGTGGAAACTCCCCCAATGGTGGTTGTGGGCATTGTGGGATATGTTGAGACCCCACGAGGCCTCCGGACCTTCAAGACTGTATTTGCTGAGCACATCAGCGATGAGTGTAAAAGGCGCTTCTATAAGAACTGGCACAAGTCTAAGAAGAAGGCTTTCACCAAGTACTGTAAGAAATGGCAGGATGACACAGGCAAGAAGCAGCTGGAGAAGGACTTCAACAGCATGAAGAAGTACTGCCAGGTCATCCGCATCATTGCCCACACTCAGATGCGTCTGCTTCCTCTACGCCAGAAGAAGGCACACTTGATGGAGATCCAGGTGAATGGAGGCACTGTGGCTGAGAAGCTCGACTGGGCCCGAGAGCGGCTGGAGCAGCAGGTTCCTGTGAACCAGGTGTTTGGGCAGGATGAGATGATTGATGTCATTGGCGTGACAAAAGGCAAAGGGTACAAAGGGGTAACCAGTCGTTGGCATACAAAGAAACTGCCCCGAAAGACCCATCGAGGTTTGCGCAAAGTTGCCTGTATTGGAGCCTGGCACCCTGCCCGTGTTGCCTTCTCTGTGGCTCGAGCTGGGCAGAAAGGCTACCATCACCGAACAGAGATTAACAAGAAGATTTACAAGATTGGTCAAGGCTACCTCATCAAGGATGGCAAACTGATCAAGAACAATGCATCTACTGACTATGACTTGTCTGACAAGAGCATCAACCCACTGGGTGGCTTTGTGCATTATGGTGAGGTGACCAATGACTTCATCATGCTCAAAGGCTGTGTGGTGGGGACCAAGAAGCGAGTACTTACTCTTCGTAAGTCCTTGCTGGTTCAGACCAAACGTCGGGCCCTGGAGAAGATTGACCTGAAGTTCATTGACACCACCTCCAAATTTGGCCATGGTCGCTTCCAGACCATGgaggagaagaaagcatttatgGGACCACTCAAGAAAGATCGCATTGCCAAGGAGGAAGGAGCTTGATTCCAGGACCACTTTGTGCAGATGGTGGGGTCTcaccaataaaatatttctactcACACTGGTTttccc