Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5l
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G
Also known as 4933437C06Rik|Atp5mg
Coordinate chr9:44824546-44832470
Strand -
Gene summary Predicted to enable P-type proton-exporting transporter activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in ATP synthesis coupled proton transport. Predicted to act upstream of or within ATP biosynthetic process and ion transport. Located in mitochondrial inner membrane. Is expressed in several structures, including alimentary system; central nervous system; cranium; eye; and genitourinary system. Orthologous to several human genes including ATP5MG (ATP synthase membrane subunit g). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5l

Retroname Coord Strand Genomic Region ENSG
Atp5lP1 chr1:55199801-55200255 - Intergenic
ENSMUSG00000061863 UCSC
Atp5lP2 chr1:62019997-62020289 - Intragenic
ENSMUSG00000100344 UCSC
Atp5lP13 chr11:21049682-21049919 + Intragenic
ENSMUSG00000084362 UCSC
Atp5lP14 chr11:45704388-45704827 + Intergenic
ENSMUSG00000083017 UCSC
Atp5lP15 chr11:86076111-86076561 + Intragenic
ENSMUSG00000080823 UCSC
Atp5lP16 chr11:97658842-97659294 + Intergenic
ENSMUSG00000084168 UCSC
Atp5lP17 chr13:34745917-34746373 + Intergenic
ENSMUSG00000113554 UCSC
Atp5lP19 chr14:69112229-69112675 + Intergenic
ENSMUSG00000114679 UCSC
Atp5lP18 chr14:121064523-121064979 + Intergenic
ENSMUSG00000115028 UCSC
Atp5lP21 chr18:83923919-83924164 + Intergenic
ENSMUSG00000117826 UCSC
Atp5lP4 chr4:48675108-48675297 + Intergenic
ENSMUSG00000080850 UCSC
Atp5lP3 chr4:135017579-135018029 - Intergenic
ENSMUSG00000087270 UCSC
Atp5lP5 chr5:24786449-24786903 - Intergenic
ENSMUSG00000067719 UCSC
Atp5lP6 chr5:33932239-33932661 + Intragenic
ENSMUSG00000107149 UCSC
Atp5lP8 chr6:66722950-66723392 + Intergenic
ENSMUSG00000108231 UCSC
Atp5lP7 chr6:105508428-105508889 + Intragenic
ENSMUSG00000108270 UCSC
Atp5lP9 chr7:41905621-41905840 - Intergenic
ENSMUSG00000108562 UCSC
Atp5lP10 chr7:45583214-45583704 + Intragenic
ENSMUSG00000109673 UCSC
Atp5lP11 chr7:62125991-62126462 + Intergenic
ENSMUSG00000072460 UCSC
Atp5lP22 chrX:37485765-37486223 + Intergenic
ENSMUSG00000081473 UCSC
Atp5lP12 chr10:95972411-95972896 + Intergenic
ENSMUSG00000096486 UCSC
Atp5lP20 chr16:55888946-55889200 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_013795.5
GGGGAAGGGGTCCTGCCGCGGGTCCTTCCGGGGGTGACATTCAGCCGGCGGTTCGGGGAGACGTACCTTCCACCTTAGACCATGGCCAAGTTCATCCGTAACTTCGCGGAGAAGGCACCGTCGATGGTAGCCGctgCCGTGACTTACTCGAAGCCTCGATTGGCCACATTTTGGCACTACGCCAAGGTTGAGCTggttcccccaacccctgctgaAATCCCTACAGCTATTCAGAGtgtgaaaaaaatcattcaaagtgCTAAAACTGGTAGCTTCAAACACCTTACAGTTAAGgaagCTGTGCTGAATGGTTTGGTGGCCACTGAGGTGTGGATGTGGTTTTATATCGGAGAGATCATAGGCAAACGTGGCATTGTTGGCTATGATGTTTGAAGACCAAtctttaacttctgatttgagttCTTATTTGAATGTTCTTGGACCATGTGTAACAGGACTGCTATCTGAATAAAATACTAGGTGTTGAaaacactgctgtgttttctctGTCAA