Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name GM2A
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ganglioside GM2 activator
Also known as GM2-AP|GM2AP|SAP-3
Coordinate chr5:151253185-151270440
Strand +
Gene summary This gene encodes a small glycolipid transport protein which acts as a substrate specific co-factor for the lysosomal enzyme beta-hexosaminidase A. Beta-hexosaminidase A, together with GM2 ganglioside activator, catalyzes the degradation of the ganglioside GM2, and other molecules containing terminal N-acetyl hexosamines. Mutations in this gene result in GM2-gangliosidosis type AB or the AB variant of Tay-Sachs disease. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2009]

Retrocopy(s) from GM2A

Retroname Coord Strand Genomic Region ENSG
GM2AP2 chr1:171392319-171393227 + Intergenic
ENSG00000239428 UCSC
GM2AP1 chr3:145684536-145685953 + Intergenic
ENSG00000241695 UCSC

Expression

Transcript Sequences

>NM_000405.5
GCAGTTAACTCCGCCCTGACCCACCCTTCCCGATGCAGTCCCTGATGCAGGCTCCCCTCCTGATCGCCCTGGGCTTGCTTCTCGCGGCCCCTGCGCAAGCCCACCTGAAAAAGCCATCCCAGCTCAGTAGCTTTTCCTGGGATAACTGTGATGAAGGGAAGGACCCTGCGGTGATCAGAAGCCTGACTCTGGAGCCTGACCCCATCATCGTTCCTGGAAATGTGACCCTCAGTGTCATGGGCAGCACCAGTGTCCCCCTGAGTTCTCCTCTGAAGGTGGATTTAGTTTTGGAGAAGGAGGTGGCTGGCCTCTGGATCAAGATCCCATGCACAGACTACATTGGCAGCTGTACCTTTGAACACTTCTGTGATGTGCTTGACATGTTAATTCCTACTGGGGAGCCCTGCCCAGAGCCCCTGCGTACCTATGGGCTTCCTTGCCACTGTCCCTTCAAAGAAGGAACCTACTCACTGCCCAAGAGCGAATTCGTTGTGCCTGACCTGGAGCTGCCCAGTTGGCTCACCACCGGGAACTACCGCATAGAGAGCGTCCTGAGCAGCAGTGGGAAGCGTCTGGGCTGCATCAAGATCGCTGCCTCTCTAAAGGGCATATAACATGGCATCTGCCACAGCAGAATGGAGCGGTGTGAGGAAGGTCCCTTTTCCTCTGTTTTGTGTTTGCCAAGGCCAAACTCCCACTCTCTGCCCCCCTTTAATCCCCTTTCTACAGTGAGTCCACTACCCTCACTGAAAATCATTTTGTACCACTTACATTTTAGGCTGGGGCAAGCAGCCCTGACCTAAGGGAGAATGAGTTGGACAGTTCTTGATAGCCCAGGGCATCTGCTGGGCTGACCACGTTACTCATCCCCGTTAACATTCTCTCTAAAGAGCCTCGTTCATTTCCAAAGCAGTTAAGGAATGGGAACCAGAGTGTTTTAGGACCTGAAGAATCTTTATGACTCTCTCTCTTTCACTCTTTTTTTTTTTTGTCACTAAGTTAAAAGCGAAGTGAGAGTATTAACGTTTTTGTTCTCCTCCGGCCCCCTGTTACAATGAAGGGGCAAAAGTATTTGCTCTTAGTCTATTCCTCCCTTAACTTCTGTGACTAATTTTTATTTCCTTTCTAGATTTGCCCAATTAATACTAGGGTGCAGTGTATCCTGGAGAGGTAGGGTGTGTGGGGGAGGAATCCCTTGGGGGAGATATTAGGAGTGCTCTGTTGTTTACAAACTCAGGTACCCGCAGGGCCTAGCAAGAGACTTAAATGACTGATAAGAACCGTGAGAAACATGTTGCTTCCAGGCTTGATTTCGAtttttcgctttttttttttttgagacagaatctcactttgtcaccaggctggagtgcagtggtgcaatctcacctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagcttggactacaggccctgccaccacgcccggctaatttgtgtatttttagtagagatggggtttcaccatgttggccaggatggtctcgatctcttgacctcgtgatctgtccaccttggccttgcaaagcgctggattacaggcatgagccactacacccagccGATTTTTCCTTTTTGATTAAAGATGCTATTACAATGTAAATATTTCTTACACAGAAAGTCACAGCACATGTGCCCATTGATACAAGGCTGCTGAGGCCTGGTCTCCAGTTGGAAATATAATTAAgggtggcaaggactggagtcagttggagagtgcatagccagtctgtgaagacaactgccagatactggcaatactccagcctggtgacagagtgagactctgtctcaaaaaaaaagtttcaatgtttactcctagagaagccaaaaatccagatttgtatatgaaatcttaccattttaaaagattggcagctaattatttttttaaaaagctgtgcagtgtgatgtgtcccaaacggactggctcatgggtggccacgtcacaacctctgATCTCAGACCGTGCATGCCTTGTCCTCTTAAGACAACTCCTGTGGCACCGTTTCTCCCTCCACAGGGCCAAAGCCATAGTGTCCGGTCCCAAGGACAAGGCTCTTCCAGTGCTAGGAGAGGTATGAGCAGCCTCTCACCTGTGAGCTGTGGGGATCACAAGGCTGCCTGCCTCAGTCTTGGAGTCCTGTTGGGTGAATGAGGCAGATGGGAAAGAGCCTCACCAGCAGCTGCTTTTGGAGCAGGGGTCCAAGGAAGAGAGGGTGGCCTCGACATCAAACTGCCTGGATTTTTCTACCACCCTGTTACATCATAACAACTTCTGAAACACACACCAGCCCTGAGTTCTGGGCTCATTTGAAGCCTGGAATAGCAATAAATCTTTTTAACTTGCGGACAGTTTCCCCTTGCCTTGGCTGCATATTTCACTGATCACATCTCAGGATTTCAAAAGCATTTTTGGGGTGGGGCTCTTTTGGTTGGAAGGGTTTGTTGGAACGGTACAGGTGAGCCGAGGTGATTCCAGGGACGGACCCTTCTGCAGGAGCTTGAGCTTGCTTGTTGTCTCTGCTTCATCGCCATCCAGCTCCCTTGTTTGCTATTTTGCTTTCCATCACATCATGACtgcggagagcaaaaatcacctagtgaccattgaacaggtcccagagacaaaatctttttatctgaggaatttaAaagggagcaaagaccacctggtgactatcaggccatgcagaggcaaaacgccttatttggggaaaattaaaagtaattagactttcctattatctaaagcaggcatctggttccagatttcttttccccgaaaaaaaccttagaagtaactaaaatttctgtacatctccggaatgccatgctgaaactcactgcaaccccacggtcccgctttaaggtccataaatatccctaaggaaaaatccaccgtggtacattcagtcctctcaccgaggtgccccatggcagtcttctgcagcattcttctaatacctttcctttttcaaacctatactgttgttggtgaattctttttaccaacccacgagttgaccacttcccaatgccggggatctgacacctcacctggcaATGACCTCCACAGCCGTTTCCCTCTGTTGGATCTTCCAGCCTTATTCTCAACAGTTCATTTTTAGTTCACATTCTTGACCGAATCTCAGTAGCTCAGTTAATCTTTTTATGTCTGCTCTGCTCTTGGGTCATATGTTCCGTGAGGTTTCTTAGGGGTGGGGGATGAGGAGTTaaaggtggcatcttcaatcgcaggtcaaagcagactttaataaatggtgctgagccaactggaaagccccttggagaaagttgaagttagacctgtacttcacaccatatgcaagaatgaactccatctggatccaggatccaaatgtaagaaaatgaagccatataaatacagaaggaaacgtggtggaaatatccagtggcaacaaaatattgacacatttgactacatgaagataataaaaatgcttagtaaaaacacaataaaatcaaatgactgggagaaaaatttatccagcctatataatagacaaa