Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Lsm2
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
Also known as D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP
Coordinate chr17:35200830-35204867
Strand +
Gene summary Enables protein kinase binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to act upstream of or within mRNA catabolic process and spliceosomal tri-snRNP complex assembly. Predicted to be located in cytoplasm and nucleoplasm. Predicted to be part of Lsm1-7-Pat1 complex; Lsm2-8 complex; and nucleus. Predicted to be active in P-body. Orthologous to human LSM2 (LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lsm2

Retroname Coord Strand Genomic Region ENSG
Lsm2P1 chr12:51756910-51757377 - Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001110101.2
GGGGACAGGAAGTTCCGCCCCTCTACCGGTTTGGCGGTCCTCTCGGCTCTGCCCTACCCCGCTCCCTTTGAGCCTGAATTCAGCCGAGGTTTTCGCGGCTCCCCGTGCGCCTGCGTGATCCAGTCTTGCTTCACGCGCGGGCTCGCGCTCCGGCTCCCGCCCTGCCTCCGGCTCGCAGTCCCCGGCGCCTTCCTTCGCGGTCCAGGCCGCCCCGCGTGGCGCCAGCACCATGCTCTTCTACTCCTTTTTCAAGTCTCTTGTGGGCAAGGATGTAGTCGTGGAACTCAAGAATGACCTGAGCATCTGTGGAACCCTCCACTCTGTGGACCAGTACCTCAATATCAAACTAACCGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTCAAGAACTGCTTCATCAGGGGCTCAGTCGTCCGCTATGTGCAGCTGCCAGCAGATGAGGTGGACACACAACTGCTACAGGATGCAGCAAGGAAGGAAGCCCTTCAGCAGAAGCAGTGATggcacctcccccctccccctcacttccCCATTGGTGACCCAGAACTTGACGTCCTACTGAGGACAAGAACACCCCTGCCCAATACTTaaggtgtgttttgttttgttaatgattttttttttttctttttaactgaatGGATGAGAGATAATTCCTCTGCTGAGAAGGGAGGGTAAGAGAGCCAGGAACTGCAGAATGGTCCTGGACTGGCTCCCAGTCTGTACCTTTTTCTCATCTTTCCTGGAGATGGGAGCAGCATCCTAAGCCCTTCCGTGGCGACATGTAATACATTTGAGGGATGGAAAGATCTGTCCCGCATCGGGAATAAAACTTATGATGCAAGCTGAA