Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Prpf19
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name pre-mRNA processing factor 19
Also known as D19Wsu55e|NMP200|PSO4|Prp19|Snev
Coordinate chr19:10872595-10886923
Strand +
Gene summary Predicted to enable identical protein binding activity and ubiquitin-ubiquitin ligase activity. Involved in proteasomal protein catabolic process. Acts upstream of or within several processes, including inner cell mass cell proliferation; positive regulation of astrocyte differentiation; and positive regulation of mRNA splicing, via spliceosome. Located in cytoplasm; lipid droplet; and nucleus. Is expressed in several structures, including extraembryonic component and genitourinary system. Orthologous to human PRPF19 (pre-mRNA processing factor 19). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Prpf19

Retroname Coord Strand Genomic Region ENSG
Prpf19P1 chr18:24390390-24392245 + Intragenic
ENSMUSG00000091363 UCSC

Expression

Transcript Sequences

>NM_001253843.1
ATGCTGGGAAAGGGCAGTTTCCGTTAGCTGCAGAAGGCTGAGGCGCGCCACCGGCCACCTCCCCACGTGAAGCAGTTGTGCGAGCATCGCCACGCTGGGCAGCTGTCTACCCGCGTCCGAGCGCTCCGGAAGCGGCGGGGGACCGGAAGTGGCCCGCGGAGGCTGCAGAGAACCGGGAACCCTCTGTGAGGCGACTGGCAGCAGCGCTACGACGGCGCCATGTCCCTGATCTGCTCGATCTCCAATGAAGTGCCAGAGCACCCGTGCGTGTCCCCTGTCTCTAATCATGTGTATGAGCGGCGACTCATTGAGAAGTACATTGCAGAGAATGGCACAGATCCTATCAACAACCAGCCTCTCTCAGAGGAGCAGCTCATCGACATCAAAGTTGCTCACCCAATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGGCCGAATTCTCCGGCTCTCCCCCAGTCCTCACAGTGGCCTACCCTCTCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGCCTGCCGAGTCATTGCCCGGCTCACCAAAGAGGTCACTGCTGCTCGAGAAGCTCTGGCTACTCTGAAACCACAGGCTGGGCTTATTGTACCTCAGGCTGTGCCAAGCTCACAGCCCAGTGTTGTGGGTGCAGGAGAGCCCATGGATTTGGGTGAGCTGGTGGGAATGACCCCTGAGATTATCCAGAAGCTTCAAGACAAGGCTACTGTGCTAACCACGGAGCGTAAGAAGagaGGAAAGACTGTCCCCGAGGAGCTGGTGAAACCTGAAGAGCTCAGCAAGTACCGGCAGGTGGCATCCCATGTGGGTCTACACAGTGCTAGCATTCCTGGGATTCTCGCTCTGGACCTGTGTCCCTCAGACACCAACAAGATTCTCACTGGTGGGGCAGATAAAAATGTTGTTGTCTTTGATAAGAGTACTGAGCAAATATTGGCCACTCTCAAAGGCCATACCAAGAAGGTCACCAGTGTGGTGTTTCATCCTTCTCAGgaactgGTGTTTTCTGCGTCCCCTGATGCTACTATCAGGATTTGGTCAGTCCCGAACACTTCCTGCGTACAGGTTGTTCGGGCCCATGAGAGTGCAGTGACAGGCCTCAGCCTCCATGCTACTGGAGACTATCTCCTGAGCTCCTCTGATGATCAGTACTGGGCCTTCTCTGACATCCAGACAGGGCGTGTGCTCACTAAGGTGACAGATGAGACCTCCGGCTGCTcTCTTACCTGTGCACAGTTCCACCCTGATGGGCTCATCTTTGGAACAGGAACCATGGACTCCCAGATCAAGATCTGGGACTTGAAGGAGCGTACCAATGTGGCCAACTTCCCTGGCCATTCTGGCCCCATTACCAGCATCGCCTTCTCTGAGAATGGGTACTACCTGGCCACAGCAGCTGATGATTCCTCAGTCAAGCTCTGGGACTTACGCAAGTTGAAGAACTTCAAGACATTGCAGCTGGACAACAACTTTGAGGTGAAGTCACTAATCTTTGACCAGAGCGGTACCTACCTGGCGCTTGGGGGTACAGATGTCCAGATCTACATCTGCAAACAATGGACAGAGATTCTTCACTTTACAGaGCACAGTGGCCTGACCACTGGAGTGGCCTTTGGACACCATGCCAAGTTCATCGCTTCAACTGGCATGGACAGGAGCCTCAAATTCTACAGTCTGTAGGCCCTATGCCTTCTCACAGTTCTGGGCCTCATCTCAGTAGTGGGTTAGAGttagagggtgggggtgggggtgggactttAGGAGGAGAGGGAGGTCTGGTTGGGGGGGGACATTCACATCATTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATCCATGCAGCCTTTGGGCCCCAGGGAACGGTCACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTcagctcttctgagacagggaggaggagccAAGGGAGCTGtgaaggggaggggcaggaggactCTTGCAGGGTTTTGTAAGCAGCGATctagtttcattaaaaaaaaaagctacacagTAAACAGTCAGCTTCTTGTGTCTGTCTGCCAGAAACCCTGACTGGGGAAGGTCATGGGAGAGGGAGCCCAGTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGCCTCCATGCTCCGGAAGCCTTGACCTTGTTTCCAGGGCCTCTGTCACTTGTGCTGTGCTTGCTCCCTGACTTGGCCTCTCTTACAAGCCGGAAAGGTAGCGAGGCGCTAGAAGATTAGTCTTAGCCTGCTGGTGGGTTGCTGTGAGTCGATTGCTAGGGATAATACTTCAGGGGCGATGATACACACTGATTCCTGGCTGGCTTGACTGGCAGCTAATCTGTTGAAGTAGAGCTGTTCCCAGGGCAGACAGCTAGACTAGAGCACAGTAAATAAAACATTAGATGATAAAAACAGGAGGGGATTAATGTGGGCTCCTGTGGCTGCTTGACATTTAGAAGTTACCTGGTACTAAAGGAGGGGAGAATTGtaggtagaaggaaggaaggctctgAGGTTGAGGTAAGTGAGGTATGGGCAGCAGGAGGTCCTGCTGCTGTCCAAGGGTAAGGAACCATTAGCTGTGCCTTGGGGATCCTTAGGGCCGGAGTAGGGCCACCCCAATGGAATGTTGGCATTTGGAGCCTGCTTTGAGGTTAGGAGTGTGGCAAGatgagggaggaggggggggggggacagggggAGGGTTGGTGAgttcacagagaaactcttgggAAGGAAGACCTGAGAAGTGAGCTATCGCCTAAAAGGCTATGGGGAAGCTAGGGGGTCCTGATAACACAACAGAACAACTGGGTATGTTCTGTCAGGCTGTCCTGTGGGCAAGGAGATTGGAATTTACCCTATCTGTGATTACTATGTAGCCCACTGCTCCCTAGAAGTGTATCCGGTAAACctacaggggctggggagacagctccgTTAGTAAAGTGCTTTCTAGGTCACCATGAGCTgaatttaatccccagcacctaaTGTagaaaagccaagcatggtgagcccttcctctcagtgctggggaggcagagacacaagGAGCCCAGGAGTTCACACACAAATTGAACTGACCTAACTAGTGGGCCCTAGActaaaaccctgtttcaaaacaactcCTAAGGATGATATCCAAAGTAATCAAGCCTCTGCCCTCTACATGCATATGTACGTATCTGTATTCCCCGTACGAATACACAGGATTACAAAGGGCCAAGAGATGACTGAGTGATCATGTTCACTGTGATGGAGCTTGCTCTAGACTGTTGTAAGCAGCAGTGAGCATGCCAGGGTCGGTGGGCATCCTGGGCCATGACGCTCAGTGGGTTGCTGAGTTGTGGTAGGTGACCATAGAAGCTGGAGCGGTGAGGCAGTCAGTGCTGGAGTGCGTTCTCACAAGTTCCTCACACTGACATCCATTCTGGACTGAAGAAGCTGTGGCTTCTCGTGGGATTGCTCTAGTTGAACATGCCCTCAagcagttttatttcctttttctttgaaggctgggtttctctttatagccctggctgtcctagaactcactctgtctcctgagtgctgggattaaaggcatgtgccaccattgcccagtgaAGTGTggtctttaaaaaattgtgtcttaCAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAACTAAGTAAGAGATGGGCTGATGTCTGCAGGTGTCTGCAGGTGCTAGTGCAGTGCCagtgaagggagaggggaggttgAGGGCATGGCCTGGGACATCCTGGGCATAAACTGGTCCCCAAAGCTGGCCAGTACAAAGCCATTGAGTGGTTGTTAGATGTTAATGTGCAGTTTTATGATCCACCTAAAAAGATAGTGAAAGACaagatgtgggaaagcctttctGGTCAGCCTGAAGttgtgtgtgaagtgtgtggcATGTGCACAGGGGAGCCCTGACATACACCAGAGATGTAAACACATAGCCACCCCTCCTTATAGGGCATAGTTTGTATAGTACCACCTCACAGGACAGTGAGAGAGTGCATGCAGTTAGGGCAGGAAGTACAGGAACGGATGTCTGGAAGTCCGCTGAGTGACCCCTCCACCCACCCCTTGTATGAGGGAGCATTCCCAGTCAGCCTAATCTTGAAGGTTTCTTGCTAGTAGTTGCAGCTACTGTGATGGAAGGTGACACAATAAAAGCAAGCTTTCATTTGGGGCTTGATGGATCCTAAAGGGCTCCATCTTCCTGGACTCATTTGTAGGCCACACAATCCTAGTAGGTAGGGTCTAGGAGCATCACAGGGTCTGGTGCCAAAGAGAATGTGTTTGCTATGAAGTGGGTCAGTGCTTACTGTACCCGATGAACATTTGAACCTCTGGATGTTCAAAACTATGTCCCTTAGCTGTTGAACTGACAGCTTGAACTTGCGCTTGAACTTGGAGTGCCAACTACAAGGTCACCTAGGTGCAGGGAAATTAACACTAGCTCCCAACCAACCTAGTACCTTGGCTGAGCTGCAAAGCATGCCTCTAGCCAGCAGGCGGTGCTAATTCCTTTCTGCAGGTGAATGTCAGAGAAGCCTAAGACTTGGCCTTTGCCTGTGATTTTAAAGCAtagtttcagagacaaagctgAGACAGCAATGGATAGCTAATGACCTCCTTCATGGGTCTTGGGAGTGTAGGGTCATAGTTAGTATGGACTTTGGCATCAAGCCTCAGTTTAACTCCTAACTATACCTTTTTACAATGAGTCTTGTGTCTGTCTCTACCTGTTTGTGGTGCCTACCTGGTAGTGCTAAGAGAGCTGGTAGTAAGCTATTGCAAGGAGCACAGGGTGGCCCTCAGTAACCAGTGACTGTCCCTGCTTTGGTATGGCTGTTGGTAACAGTTAAGGTGGCCCTTAGTGCTTGACCCTAATGGTGTTAAGGTTTGACCTAacttctccatctttttttttttcttggtttttcgcaACAGGGCAGGGATTCTCTATATagcactggttgtcctggaactctgtagtccaggctggcctcaatctcagaaatctgcctgcctctgcctgcctctgcctaccaagtgctgggattaaaggcctgcaccaccattcTCTGGCTGACTTCTCCATCTTTAAGCCCGATGTTAAAACTTAATCAATCCAGCTgagtgtagtggtgcacaccttaaatgccagcactcagtggtaggcagatctgagttcaaggccagcctggtctacagagtgagatccaggacaactaggactacatagagagtccTGTCTtgcaaaagcaaaaagcaagcTGCACAAAACCAACAGCTCATCAGTCCAGCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTCCTCTGCCCGCCTAGCCCCACGCTAAGGATTTGGATGGCACACATTGGAAAGAGAGATTACAGTTCTCATTGTTACAGCAGAATTCTCTCTAGTCCACACCAGCACCTGACAGGCAATTCCTCACCGCCTACATTGGTGCTCTGGTCTGTCCTCTTGCCCTAAGTCTGTGGATTGAGTCTCTGCAGGCTCCCCTCTCAGAGGCCTACATCTAGACTTCTGCCTTTGGCAGGCTCCCCGTTCTCATCCAGGCGGAATGTCAACATTGTCAGCATTCTGAAGAaggcccccaccccaacccccagagttcccaaaTTAGAAGCTGTTTTTACTTCccagaggttttgtttttattttcatcacaTCTGTGTGACTTTCTCCCCACCACCCCCCACGTTAGTTCAACAGTGACTTaaaggatataaaaataaaatttggcaTTTTTGTTGTTTACTTTTAAAGACTGGTCTGGTATTGCTGCCCATTATTGGAACAGAAAAGGCCTTTTGCATTAAATGTGCCTGCAGGAATGCCTGGATAGAAGCCACATACCTTAAGCTGTAGCAGTGAACTCTGCAATaaagtatcatttatttttatctta