Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rnps1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name RNA binding protein with serine rich domain 1
Also known as -
Coordinate chr10:13786339-13796720
Strand +
Gene summary Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in mRNA metabolic process; positive regulation of apoptotic process; and regulation of mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of ASAP complex. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human RNPS1 (RNA binding protein with serine rich domain 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rnps1

Retroname Coord Strand Genomic Region ENSG
Rnps1P1 chr1:234927496-234929239 - Intergenic
 N/A UCSC
Rnps1P2 chr2:122019710-122020883 + Intergenic
 N/A UCSC
Rnps1P3 chr2:49789769-49791534 - Intergenic
 N/A UCSC
Rnps1P5 chr6:82074822-82076217 + Intergenic
 N/A UCSC
Rnps1P6 chr14:46101057-46102071 - Intragenic
 N/A UCSC
Rnps1P7 chr18:9921974-9922712 - Intergenic
 N/A UCSC
Rnps1P9 chrX:31054294-31056058 + Intergenic
 N/A UCSC
Rnps1P4 chr5:24762449-24764166 + Intragenic
 N/A UCSC
Rnps1P8 chrX:140223493-140224820 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001011890.1
GACAGAGTTGCGCCAGCGTCCGGGTCTGAGAAGAGCGGGAGGAGGTGGCGGCCTTGGGAAGATGCTGCTCTTTGGCGTAAATTGCAATCGATTAGGGATCGTTTCTCAGACTCAAGTTAGAAGTGAGAGTTCAGATAAGTGAGGCCGACATTGCTGCCTTGAAGAAGGGGAGAATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCAAAGAGAATAATAAAAAGTCCAGCACTAGGGCTCCTTCTCCTACCAAACGAAAGGACCGCTCTGATGAGAAGTCCAAGGATCGATCTAAAGATAAAGGGACCACTAAAGAGTCCAGTGAGAAGGATCGTGGCAGAGATAAGACCCGGAAGAGACGCAGTGCTTCAAGCGGAAGCAGCAGCACCAGgtccaggtccagctcaacctccagctcgggctccagcaccagcacgggctcgagcagtggctctagctcgtcttctgcgtccagccgctcaggaagctccagcacatcccggagctccagttccagcagctcctccggctccCCAAGCCCTTCTCGGCGCAGACATGACAACAGGCGGCGTTCCCGCTCCAAATCCAAACCACCTAAAAGAGATGAAAAAGAGAGGAAAAGGCGGAGCCCTTCACCTAAACCCACCAAAGTGCACATTGGGAGGCTCACCAGGAATGTGACCAAGGATCATATCATGGAAATATTTTCTACTTACGGGAAAATTAAAATGATTGACATGCCTGTGGAAAGGATGCATCCTCATCTATCCAAAGGCTATGCGTACGTGGAATTCGAGAATCCGGATGAAGCAGAGAAGGCACTGAAACACATGGATGGAGGACAAATAGATGGCCAAGAGATCACTGCTACTGCGGTGTTGGCACCCTGGCCTCGTCCACCGCCTCGGCGATTCAGCCCACCCAGGAGAATGCTTCCACCGCCTCCCATGTGGCGTAGGTCACCCCCACGGATGAGGAGAAGGTCTCGATCCCCAAGACGCAGGTCCCCTGTGCGAAGGAGGTCTCGATCGCCTGGCCGCCGCCGCCACAGGAGCCGATCCAGCTCCAACTCCTCCCGATAAGCAGGGACATGGATTCGCCCTCTGTAACTTATGTTCCCCAGACTCAGTTTTGTCCTTTTCTCTAGCCAAAGGAGGATCTGTAAGGAAGGATCCCTTACCAGGGTAGGCTTTGAAGACAGCAGTTGAGATGTTTCCTCTGCAGGAGGGTTCTGCCTTGTAGAGGTACTGTTGATTCAGGACTGTGCCCGTAGAGGTACCCTGTAGTTTTCTGGCTAGAAAGTTCGCCCCTTCAGTTCTTGATAGTCTGTTCAGTAGCAGAGCCAACTGGAACATAGGGCAGCACACCGTTTTCCAGATGACCTAGGACCCGTCAGACAACCTGGCCAAGCCATGCTGTGCCACAGCAGTGGAAAGGACCAAGCCTCTGTCTGTTCTGTTAGGCCTGCCCATGGCCCCTGCTGAGTACCCTTCACCTTCTAGGGTTAAAACCTTTGAAGGATTCCTCCATAAATGGTTGTCTTTTCTGTCCCAGTGTCTCTGTTACTTTCTAAAATTGGTGAACCAGTTCTACAGGGTCCTGATGAAACCTAGCCCACCCCATTGTCACCTGCCATTCATGGTGATGTCGCAGGTTAGCCTTGGCAATGTGTGCGTTGCCTCTTTGCTTTTGTTGTACAGTCAGTACTATAAAATCTGTTTTGAGTTTTATAACTTTGTAGCATTTTAGATAAGGTTGTGTTTGTACTTGTGTAGAGTGAAAGGACTGTTGAATAAACCTAGGGTTAGAGTGCAAA
>XM_006245933.2
AGAAGTGGGGGCGGGAACAGTTGCCGACCTTTGCTCCTCCTCGGCTAGCGTACATTGGTCGGGTTGCTTCCGTCATCGCTGTGCGACGACGGCTGCGCTTTCCCGCTTCTCAACTCTGACGACAGAGTTGCGCCAGCGTCCGGGTCTGAGAAGAGCGGGAGGAGGTGGCGGCCTTGGGAAGATGGCTCCTTCTCCTACCAAACGAAAGGACCGCTCTGATGAGAAGTCCAAGGATCGATCTAAAGATAAAGGGACCACTAAAGAGTCCAGTGAGAAGGATCGTGGCAGAGATAAGACCCGGAAGAGACGCAGTGCTTCAAGCGGAAGCAGCAGCACCAGgtccaggtccagctcaacctccagctcgggctccagcaccagcacgggctcgagcagtggctctagctcgtcttctgcgtccagccgctcaggaagctccagcacatcccggagctccagttccagcagctcctccggctccCCAAGCCCTTCTCGGCGCAGACATGACAACAGGCGGCGTTCCCGCTCCAAATCCAAACCACCTAAAAGAGATGAAAAAGAGAGGAAAAGGCGGAGCCCTTCACCTAAACCCACCAAAGTGCACATTGGGAGGCTCACCAGGAATGTGACCAAGGATCATATCATGGAAATATTTTCTACTTACGGGAAAATTAAAATGATTGACATGCCTGTGGAAAGGATGCATCCTCATCTATCCAAAGGCTATGCGTACGTGGAATTCGAGAATCCGGATGAAGCAGAGAAGGCACTGAAACACATGGATGGAGGACAAATAGATGGCCAAGAGATCACTGCTACTGCGGTGTTGGCACCCTGGCCTCGTCCACCGCCTCGGCGATTCAGCCCACCCAGGAGAATGCTTCCACCGCCTCCCATGTGGCGTAGGTCACCCCCACGGATGAGGAGAAGGTCTCGATCCCCAAGACGCAGGTCCCCTGTGCGAAGGAGGTCTCGATCGCCTGGCCGCCGCCGCCACAGGAGCCGATCCAGCTCCAACTCCTCCCGATAAGCAGGGACATGGATTCGCCCTCTGTAACTTATGTTCCCCAGACTCAGTTTTGTCCTTTTCTCTAGCCAAAGGAGGATCTGTAAGGAAGGATCCCTTACCAGGGTAGGCTTTGAAGACAGCAGTTGAGATGTTTCCTCTGCAGGAGGGTTCTGCCTTGTAGAGGTACTGTTGATTCAGGACTGTGCCCGTAGAGGTACCCTGTAGTTTTCTGGCTAGAAAGTTCGCCCCTTCAGTTCTTGATAGTCTGTTCAGTAGCAGAGCCAACTGGAACATAGGGCAGCACACCGTTTTCCAGATGACCTAGGACCCGTCAGACAACCTGGCCAAGCCATGCTGTGCCACAGCAGTGGAAAGGACCAAGCCTCTGTCTGTTCTGTTAGGCCTGCCCATGGCCCCTGCTGAGTACCCTTCACCTTCTAGGGTTAAAACCTTTGAAGGATTCCTCCATAAATGGTTGTCTTTTCTGTCCCAGTGTCTCTGTTACTTTCTAAAATTGGTGAACCAGTTCTACAGGGTCCTGATGAAACCTAGCCCACCCCATTGTCACCTGCCATTCATGGTGATGTCGCAGGTTAGCCTTGGCAATGTGTGCGTTGCCTCTTTGCTTTTGTTGTACAGTCAGTACTATAAAATCTGTTTTGAGTTTTATAACTTTGTAGCATTTTAGATAAGGTTGTGTTTGTACTTGTGTAGAGTGAAAGGACTGTTGAATAAACCTAGGGTTAGAGTGCAAA