Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Skp1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name S-phase kinase-associated protein 1
Also known as Skp1a
Coordinate chr10:37594578-37609498
Strand +
Gene summary Predicted to enable several functions, including F-box domain binding activity; beta-catenin binding activity; and cullin family protein binding activity. Predicted to be involved in several processes, including SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; positive regulation of ubiquitin protein ligase activity; and protein ubiquitination. Predicted to act upstream of or within protein K48-linked ubiquitination and protein monoubiquitination. Predicted to be located in centrosome and cytosol. Predicted to be part of Cul7-RING ubiquitin ligase complex and SCF ubiquitin ligase complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human SKP1 (S-phase kinase associated protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Skp1

Retroname Coord Strand Genomic Region ENSG
Skp1P1 chr3:51459501-51459716 - Intergenic
N/A UCSC
Skp1P2 chr5:103386427-103387583 + Intergenic
N/A UCSC
Skp1P3 chr6:132713969-132715144 + Intragenic
N/A UCSC
Skp1P4 chr18:35739855-35740982 - Intragenic
Intragenic
N/A UCSC
Skp1P5 chr19:46145434-46146245 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001007608.2
GTAGTGGCCTTGTTCTCGAGACTTCTATTCGGTTGTGAACTCTGTTCGGCAGCCTCAGGCCTGCGGTCTTGAGACCGAGCACGATGCCTACGATAAAGTTGCAGAGTTCTGATGGAGAGATATTTGAAGTTGATGTAGAAATTGCCAAACAATCTGTGACCATTAAGACCATGCTGGAAGATTTGGGAATGGATGATGAGGGAGATGATGATCCTGTTCCTTTACCAAATGTTAATGCAGCAATTCTAAAAAAGGTCATTCAGTGGTGCACCCACCACAAGGATGACCCTCCTCCTCCTGAGGATGATGAGAACAAAGAGAAGCGGACAGATGATATTCCTGTTTGGGACCAAGAATTCCTGAAAGTTGACCAAGGAACACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTCACCTGCAAGACTGTGGCTAATATGATTAAGGGGAAAACGCCTGAGGAGATTCGTAAAACCTTCAATATCAAAAATGACTTTACTGAAGAGGAGGAGGCCCAGGTACGCAAAGAGAACCAGTGGTGTGAAGAGAAGTGAACTGTGCCTGTCACTGTAACACTAGAAGGGTTGTTCCAAATGCTAGTTGCACTGCTCTGTTTATAATTGTTAATATTAGAGATCAGTAGACAAACACAGCCTTGTCCTCACTGCATGTGTAGTTCCAGTACAGATCAGACCTGTGGCTGAGTTTCTTCTATGAGCAGAAGTTTCCTTTTTCCCCCCATTACTCCGAATAAAACCGAACTATGGGTTCTCTGTGGAAAGTGGCATTTTGGGCTTTCCCTCTTTCTGTAAAGTGATTTCTCCCTCTAGTTCATTGTCCAGTTAACTTCAGTGAGCCTTTCAAGGTTGGCATTGTAAATAAAACAACTTAGGAGAGAAGTATGCAGAAATAAAATTAACAAAACATTTGTTCATGAATCGGAAACTGGAACAAGGCAACTTGAAGTTAACGGTGCGGATGTCTTCCGACCTCTATGCTGCTGGTAAGCTCGTGTGCAGCTGGGCTCTCTTAATTGGATCTGAGGCCTTGTTTTGTCTTTTTGGTTTTTTAATCTTCTCAGCTTTGAATACGTTGCCTAGAGACTTAGTTTACTACCCAGTTTGTGGTTTGGGAGGGGGGACTGTAACTCAACAATTTGTTAGCTTTTCAATTAAAAAAGACACTTACTTCAT