Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Supt4h1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name SPT4 homolog, DSIF elongation factor subunit
Also known as Supt4h2
Coordinate chr10:75032365-75038547
Strand +
Gene summary Predicted to enable RNA polymerase II complex binding activity and protein heterodimerization activity. Predicted to be involved in RNA metabolic process; chromatin organization; and regulation of transcription, DNA-templated. Predicted to act upstream of or within negative regulation of transcription elongation from RNA polymerase II promoter. Predicted to be located in nucleoplasm. Predicted to be part of DSIF complex. Orthologous to human SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Supt4h1

Retroname Coord Strand Genomic Region ENSG
Supt4h1P1 chr1:280044947-280045535 + Intragenic
 N/A UCSC
Supt4h1P2 chr4:62949289-62950371 + Intergenic
 N/A UCSC
Supt4h1P3 chr17:10651445-10652077 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001105828.2
TATTATCGTATACGGCGAGAATGGCCCTGGAGACGGTGCCAAAGGACCTGCGGCATCTGCGAGCTTGTTTGCTGTGCTCGTTAGTCAAGACTATAGACCAGTTTGAATATGATGGGTGTGACAATTGCGATGCATACCTACAAATGAAGGGCAACAGAGAGATGGTGTACGACTGCACCAGCTCTTCATTTGATGGAATCATCGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGCGTCAGTAACTTTAAGCCAGGTGTATATGCTGTGTCAGTCACTGGTCGTCTGCCCCAAGGAATTGTGCGGGAGCTGAAAAGTCGAGGAGTGGCCTACAAATCGAGAGACACAGCAATAAAGACCTAGCTAGATGCAGGCCATAGCGTCTTGTTCTCTACTTCTGTCCTTGTTTTCTTGTGGAACTAAAAGGTGGGACCCAAAGACTCCTTGCCCTCCAGCTCAGGATCAGCAGACCCCGTGAAGGCAGCACATCCGGCCTTAAGTCACCTCCCTTTCTCTGACCACTGGTGAAGTGGGAGTGTCTGAGTGGATTCTCAGAGGCTGTATCAGGAGAGTAAGATGCTGATTTCCCACCTCTGTTCAGGGTTTTGCCTTTGTCCATGGGCAGGACTTTGGTTCAAATGCCAATAAAACAAACCTTTGGAGTACTTAAACAAAACTTAAAGAGTACTAAGGCCTGTGCCTTTGTACCTTTTCCTCTCAGGATGAAGCCTCACTTCCCTGCTGACCGGAAGTCCAATATCCTGTCCTCTCTCCCTGGTGTACCCTCCTTTGAAGGAATCAAGGCTGCTTGGTGCCTTTTTCCTTGACCCTCTTTCACTTCCCTCTCTTCCTTTGTCTCTTTTCTTTGCTCCTGTTGTACCTTTGCCAGGTGATCTGGGTTTTTGTGTTTCCATGGAAAACAGGCCCTCCTTTGGCTAAGAAGGGAGCCATGGGTAATGCCACATTGGCCAAGATGtctttctttcttttcttttttttttAATAATAAAACATTTACCATATATTCTCAC