Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Spop
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name speckle type BTB/POZ protein
Also known as -
Coordinate chr10:83231187-83311987
Strand +
Gene summary Predicted to enable RNA polymerase II-specific DNA-binding transcription factor binding activity and ubiquitin protein ligase binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process; protein polyubiquitination; and regulation of proteolysis. Predicted to act upstream of or within several processes, including glucose homeostasis; positive regulation of apoptotic process; and regulation of transcription, DNA-templated. Predicted to be located in nuclear speck. Predicted to be part of Cul3-RING ubiquitin ligase complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human SPOP (speckle type BTB/POZ protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Spop

Retroname Coord Strand Genomic Region ENSG
SpopP1 chr1:262053171-262053397 - Intragenic
 N/A UCSC
SpopP2 chr2:193970310-193970469 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001100496.1
GTGTATCGGCGGTCCCGCAGGTCCCGGATGTTGCGGGCAGTATGAGGCGAGCGCAGGGGGACAGGGACCAGCAGCTGTCGCCGCCGTTCTCAGGGTGAAGAAAGACCAGAAATCTTTGCCCCCTGACTTTGGAGACCCAGTTTAACCTTCAAACTGGCGATGTCAAGGGTTCCAAGTCCTCCACCTCCGGCAGAAATGTCGAGTGGTCCTGTTGCTGAGAGCTGGTGCTATACACAGATCAAGGTAGTGAAGTTCTCCTACATGTGGACCATCAATAACTTTAGTTTTTGCCGGGAGGAAATGGGTGAAGTCATAAAAAGTTCAACTTTTTCATCAGGAGCCAATGATAAGCTGAAATGGTGTTTGCGAGTAAACCCGAAGGGGCTGGATGAGGAAAGCAAAGATTACCTGTCGCTCTACCTGTTGTTGGTCAGCTGTCCAAAGAGTGAGGTTCGGGCCAAGTTCAAGTTCTCCATCCTGAATGCCAAGGGAGAAGAAACCAAAGCTATGGAGAGCCAGCGAGCTTATAGGTTCGTGCAAGGCAAAGACTGGGGATTCAAAAAATTCATCCGTAGAGATTTTCTCTTGGACGAGGCCAATGGACTTCTCCCTGATGACAAGCTCACCCTCTTCTGCGAGGTGAGTGTAGTCCAAGACTCTGTCAATATCTCTGGGCAGAACACTATGAACATGGTAAAGGTCCCTGAATGCCGGTTGGCTGACGAGTTAGGAGGGCTGTGGGAGAACTCTCGATTCACAGACTGCTGCTTGTGTGTGGCTGGCCAAGAATTCCAGGCTCACAAGGCTATCTTAGCAGCTCGGTCTCCAGTTTTCAGTGCCATGTTTGAACATGAAATGGAGGAGAGCAAAAAGAATCGGGTTGAAATTAACGATGTAGAACCTGAAGTTTTTAAGGAAATGATGTGCTTCATCTACACGGGGAAGGCACCAAACCTTGACAAAATGGCTGATGATTTGCTGGCAGCTGCTGACAAGTACGCCCTGGAGCGTTTGAAGGTCATGTGCGAGGATGCCCTCTGCAGTAACCTCTCTGTGGAGAACGCTGCAGAGATTCTCATCCTGGCTGACCTCCACAGCGCAGATCAGCTGAAAACCCAGGCAGTGGATTTCATCAACTATCATGCTTCGGATGTCTTGGAGACCTCTGGGTGGAAGTCAATGGTGGTGTCACATCCCCACTTAGTGGCAGAAGCGTACCGCTCTCTGGCTTCCGCACAATGCCCTTTCCTGGGGCCCCCGCGCAAACGCCTGAAGCAATCCTAAGATCCTGCCTGTTGGGAGACTCCATTCATTTTCCAGCAGCAGCAGCCACCGTTGCTGCCACTGACTGCCAGGTAGACCGCGCGGTCTGTGCGGCTTTTACTCTGTGTCGGGGGAGATGGCACCATGGCCACCCAGACTTTAACAGCACTAAATAACTTAGGGGAGCTGGGGGAGGGAAGGGCCCAGGACTCGGGCCACTCAGCCTAATGAAACCCTGTTGCTCTGTCACCGTGTGCCCTTTGGCCTGACCAAGTTTGACACTGGGATTCAGTTTAGGCGCCAGCCTCAAGCACATCCCAGCAGTGGTACTTCGGAGAAATCAGCATCTGACTGAGCAGAACAAATCGTCAGGTGCCTGGAGCAAAAAGGAAAAAAAAAGCAGAAACAAGTGGACATTTAGTTTTAAGAGATGGAAAAAGGAAAGAAGAAAGATTTTTTTTCGAAAATCAGTTTGTGGATTCCAGTAGTATTTATGTTGAAAGAAGCAAATTTTAGTTCAACTGTGGATATTTGTGAAAACTCCTCACCACCACCCAAGTGTCAGAAGAGCTCTCTCGCTAGCACTTACTGTTTGCAAGAAGCCATCCTTTATCCTCTGAAAGGTGGCCCATGGCGGCAGAAGGGAGGAAGTCATCTGATCTGGAAAGCGAGTGTTTGACAGTAGTGGCTTCTGCAGAAATTCTTACTGGTATTAAAAACTGGAAAAAATAATTCATCCAGAATTCATACTGTCTTGATAAAAACTATGATTCTGTTTTTTAGATATCGTGGAAAATGGATTTTTTTGGCATTTTTCTCTGATTTTATGTTTTCTTCCCTTCCCTTTTTCTgagagagagggagagagagaggagagagagagagagagagagagagagagaaagagaaagagaggagaaacaaatacagaaaatacataaaacgaaaagaagagaaaaggaaaTTTTATTATTATTGCTATGTGAAAAAAAATCCCAGCCCAGATGGCCTGGCTGTTTGTACCTGACTCGTCGCCTGCATAGGAGCCGGTCCTGTCACTTCTGATTAGCCCCTCTTCCAAAGGGGAGACTTCAAATGTTAACTTTTTCTTTTTGAAAATATAAATAATTACTATTTTGTACTGTGTGGTA