Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Smndc1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name survival motor neuron domain containing 1
Also known as -
Coordinate chr1:274096068-274107138
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in RNA splicing; apoptotic process; and mRNA processing. Predicted to be located in Cajal body; cytoplasm; and nuclear speck. Predicted to be part of spliceosomal complex. Predicted to be active in nucleus. Orthologous to human SMNDC1 (survival motor neuron domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smndc1

Retroname Coord Strand Genomic Region ENSG
Smndc1P1 chr10:95130583-95131208 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001035234.2
GATCTCGCTCGCCTTGTCTTTTCTTCCTGCCTGAGCCCGGCTTTTCTCCCCTCCCCCCTCGCCGGCGGATTTTTTCCTTTTCCGACCGAATCTCGTCGTGGTGGAAATTTCCCCTGCTGTAGctgtccctgccgccgctcggctcgcttccccgacccctgcccgctgtcccatccccagtcccACCCAAGATGTCAGAGGATCTAGCAAAACAGTTGGCCAGCTACAAAGCTCAACTCCAGCAAGTAGAAGCTGCTCTATCGGGAAATGGAGAAAATGAAGATCTGCTGAAACTGAAGAAGGATTTGCAAGAAGTCATAGAACTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAAACTCTCACAAGTTCAGACAGCTTTGCTTCTACTCAGCCCACTCATTCATGGAAAGTAGGGGACAAGTGCATGGCCGTCTGGAGTGAAGATGGACAGTGTTATGAGGCGGAGATCGAGGAGATCGATGAAGAGAACGGCACCGCTGCGATCACCTTCGCTGTCTATGGCAATGCCGAAGTGACTCCATTGTTGAACCTCAAGCCTGTAGAGGAAGGAAGGAAAGCAAAAGAGGACAGCGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAAAAAGCTTTGAAAAAAGCACAGAGAATAAAAGAGCTTGAGCAGGAGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCGAAAAACAAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCGCCAGAAAGTGTAACGGGCAAAGTCGGAGTAGGAACTTGTGGAATTGCTGACAAGCCCATGACACAGTATCAAGATACATCCAAATACAATGTCAGGCATTTGATGCCTCAGTAGTGAGAAACTGTTGGATTTCATCTCCGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGGGAGATCCGTTGTTGTCATTGTTTGGCTTTGGTAGGATGAAACTTGAAGACATTTGATAACTGCTACCATGTAACTTTTCATTGCTACTCACCACAGCTTCTTCAGTATGTTGAACAAGGCAACTTTTCTAGCTAAGTGCTGCATAAGTCGGCACGTAGATGACTTAGGAACGTCAGGCCACTTAACTGATGTTGTGTGGACAGTTTGTAAGTCCTAACTTGGGATTTTCAGATGCTTTGCACTTGATATATTCCAACAGTGCAGTGGAAGGGACATCAAGGCAAAACGCCAGCCTGCTGAAGAGAGCGGCTTCCGTTTTACAACCTGGCACTGTCCAGACGAGCCCGAGTATAGGTTAATTTATAAATGGCAAAGTTTATTTTGAGGTTTTTTTCCTTGAATTGTTTCCTGGGACTATTAGGTCACCTCTACAATTGACTCACCTTGTATTTTTTGTCATTGAGTTTGAATTTTATATTAAAAAACCAAACAAACCATGTTTAGGATGTGCTCCCCTTCTCTGTTTATTTGGTGTTTTCCTTTGTTGACTTCACTTGTGGTAGTGCTACCCGTTTTGGGATGTGTAATGTTTATATGGGAAGACAAAGCTGATGTACAGCCCTGTATACAGTGTAGATACTATTTTTGTaaaaaacagaacaaaaccaaaaaaaaaaaaaaaaaaaacaaaTCCAAGGCTAAATTAATGAACAAGAGTACTGAATGTCTTCATGATTACATTTTCCTGTATTTCTTGTGCATTAATCTGACCATAACTTCCCTGTATATTATGTTCATGTAGCTGAGTTTGTAATTTTTATTAACGAGATCAAGTTGCCAGCATTTGTTGGCATAAGTGAAGCACCACAGCTATCCCAAGTTGAGTTTAAACAAAACAAAGGTAGGGAAAAGGCCTTCCTGTTAATTGGAAGAAGATACTTTTTAGAGTGTGTGTTAATTTCAGTTTTGTATGTTTAACTTTAATAAATAAAGTCTGTACAA