Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pigx
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name phosphatidylinositol glycan anchor biosynthesis, class X
Also known as RGD1307289
Coordinate chr11:71938388-71954225
Strand +
Gene summary This gene encodes a type I transmembrane protein in the endoplasmic reticulum (ER). The protein is an essential component of glycosylphosphatidylinositol-mannosyltransferase I, which transfers the first of the four mannoses in the GPI-anchor precursors during GPI-anchor biosynthesis. The protein is translated from a non-AUG translation initiation site. [provided by RefSeq, Jul 2008]

Retrocopy(s) from Pigx

Retroname Coord Strand Genomic Region ENSG
PigxP1 chr4:113921825-113922317 + Intergenic
 N/A UCSC
PigxP2 chr4:114787553-114788045 + Intergenic
 N/A UCSC
PigxP3 chr8:22547267-22548159 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001100651.1
CTCAGGAACCTGGAGTTACAGGGGGTCCTAGGGTGGGAGCGCAAGGAGCGTTCTGTCCGGGTCACCGTGGAAGGTGGGGGTACGCTCTGCGTGCTCAGGTTCCTCCCGTGACCGCAGCTTgctccgcgcgcccctctcgggcgtcgggctccggcgtcctggctGCCAGCGCCCTTGCCTGGCTGCTCCTCTGGGCAGCTGGGCTGGTCGGCAGGCTCGCCGCAGACATCAGCGACGCCCGCTTCAGCGATGGTGTAAGGGCCACTTGTTCTGAAATTATTTTGAGGCAAGAATTTTTGAAAGATGGTTTCCACAGAGACCTTTTAATAAAAGTGAAATTTGGGGAAAGCATCGAGGACCTACAGACCTGCCGGCTCCTAATCAAACACTACATCCCAACAGGACTCTTTGTGGACCCGTACGAGTTGGCTTCATTACGGGAAAGAAACATAACAGAGGCAGTGATGGTATCAGAGAGTTTTAATCTAGAAGCCCCCAGCTATTTATCCACAGAGTCTGCGGTCCTCATTTATGCCCGGCAGGACGCACAGTGCATCGACTGCTTCCAGGCCTTCCTACCTGTGCACTATCGATATCACCGTCCACATAAGAAGGATGGAGACACCCTCATTGTGGTCAACAACCCTGACTTACTGATGCACTGTGACCAAGAGTTCCCAATTTTGAAATGCTGGGCTCAGTCAGAAGTAGCAGCTCCTTGTTCTTTGAAGAGTGAGGAGATCTGCCAGTGGAAAAACATGCAGTACAAATCAATACTTAAGAATTTGACAGTGCAGGTGCCAGTGGGACTGACTATACACACCTCCTTAGTGTGCTCCGTGACACTGCTCATTACGGTTCTGTGTTCTACTCTGATCCTTTTAGCTGTTTTCAAATACGGCCATTTTTCCCTGTAAGTTTTATGCAGTTAAGTGTTTTCTACCTAATAAATGAGACATATTCATTGTGA