Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pcnp
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name PEST proteolytic signal containing nuclear protein
Also known as Ab2-416
Coordinate chr11:47055641-47070319
Strand +
Gene summary Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein ubiquitination. Predicted to be located in nuclear body. Predicted to be active in nucleus. Orthologous to human PCNP (PEST proteolytic signal containing nuclear protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pcnp

Retroname Coord Strand Genomic Region ENSG
PcnpP2 chr15:28895969-28898176 - Intergenic
 N/A UCSC
PcnpP1 chr5:36440928-36441718 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006248241.3
CGTGACGTTCTTGCCCGGACTGCAAGGGGGAGGCCGCGGCGGGGAAGATGGCGGACGGGAAGGCGGGAGAGGAGAAGCCCGAGAAGCCGCAGCGAGCCGGAGCCGCCGGAGGACCTGAAGAAGAAGCAGAAAAACCTGTGAAAACTAAGACTGTTTCTTCCAGTAATGGAGGGGAAAGTTCCAGTCGCAGCGCTGAAAAGCGATCAGCTGAAGACGAAGCTGCAGACCTCCCAACAAAGCCTACAAAGATGTCCAAGTTTGGATTTGCCATAGGTAGTCAGACAGCAAGGAAAGCATCCGCCATCTCCATTAGACTCGGAGCAAGTAAGCCTAAGGAAACAGTTCCAACTCTTGCTCCAAAAACTCTTTCAGTAGCAGCAGCTTTCAATGAAGATGAAGATAGTGAGCCGGAAGAAATGCCTCCAGAAGCGAAGATGAGGATGAAGAACATCGGAAGGGACACGCCAACATCAGCCGGACCAAACTCCTTTAATAAAGgaaagcatggcttttccgataaccagaagctgtgggagcgaaatatcaaatctCATCTTGGAAACGTCCACGACCAAGACAATTAAGAGAAGTGTTCTGAGATTGGGGTGTGGGCGGGTGCATTAGAAGGAGCAGTCAGCCTCCTTTTTGTAAAGAATGGTGTAAGACTAGCTTTGGAGCCGtttttctttcttcttttttcttttccttttttctttttttttttttAAGATTGAGTGGTACACTAATAAATGAGAGTTTGCAATTAGAGGTAATTTATGTTTTATATACAGATTTCAAGACATTTGCTAATTTTGTAGTTTCACATGATTAGTTTCCAAGGGTTACAGATAATAAAGAAATCAGAAGTGGTACCTTTCTAAGAATTGCATATTTTTTTAGACACAACTATTAGCACATTAAGAGGGAAGCCAAAAGTTATTGCCTACTTCAAAGTGAAAGCAGTTCCTCTCCTGACTTCTCCCCCACATTACCTGACTGTCTGTCTGGCTCCCTGGAACAGCCTTACGAGAGGGAATTGGATTGAGAAGACAATTGTTACTGGACTATTGACTGAAAGTAAATTTAGATACAATTAAAATAAACCTTTTCCTATGGGCATTTCACCTTGTTCTGGGCCATTATATGCTAGTACTGCTTCGCTATCAGTACAGACGCTTTGCTCTTTAAAAACTTTTTTCGTTAAAAATTCTTGTATGAAGTATTGAGTATTATAACTAGCCCACTTTAATGGAGGTTGTCTCCCTTCAGGATTCTTCAAAGGACACTATTTGCTACCAAAGTGAATCAGTATTTGAATGTGCTTCTCTTGGTTTCTATTCTAGTTCCTATAATCATTTCCACCAGAACTTGAGGCAAGACATAAGGAAGCTGTTTCTTTTAAAGTACAAACCGCTGAAAACATCAGTGTGCGCACTGCTTAAGTATTTGGCTGGCTTTTATTTTTTAAAAGGTTTAAATACCAAAAGAGGAAAAGGGTGTAACGTGGTGTGAAGACAGGTGAGGCAGCTCACCCGTGACTTTTGAAGCATTTAAGTTACTGACTTACTAGATCCAGTTTTGAACTGAATTCACACGATTTCTTATTTGTACAACTCCATGGTTTATTTTAAGTATGTACATACTGAGCAGTGGTTTCAAAAGCACATTTAGTGACTGAAATGGGACAGAAATGCTTCTTCAGACACACTTTCATTGTGAGTCTCTCATCGCATATGCTCTTAGATTTCTGTATCTAGGGTGTTTGTTTTGTATTTTTTGTATCGTATATGGGCTTTTTAAACGTGACAGTTAATGCATCTTTAATAGTCACAGACTAAAGAAATGATAAAATGTCCTTGAAAATGACAATGTTAAGTTTGGAGGCGGCTTGGGTGAGTTTCATGGGTGGTGATGATTCACTAGGCAATTTTTACTGTAATGACTTCCGAGAAGCAGCCTGCGGGTGTACCTGACACGTTCACTACATTGAGTCCACTTAGTAAGCCCGAGTACACGATGGGAATGTACATTAGCACTATTAGTTCATACATGATTTAAGTATATCAAGATACATACATTTACCTTTTACGTCTGCAAACTGTCCTGTGGCCATTTTACTGTTTGTTGAAATAACACCTCTCCTACATGTTCTTTACTTGACTGGAAGAACAGTTAACCTGAGGTCAAGATGGAGAGACGACTAAGCTAAGTGTCTTTACTAAAACTACAATAAATTTTGTCAAACTTGG
>XM_017597930.1
GCAAGGGGGAGGCCGCGGCGGGGAAGATGGCGGACGGGAAGGCGGGAGAGGAGAAGCCCGAGAAGCCGCAGCGAGCCGGAGCCGCCGGAGTTAATTCATGGGAGCCTCTTGTACTGCCACACAATCTCAGTTCCTGCTGTACACTCTAACAAGCAGTGAAGAGACTGTTGGGTCAGTAGGTGACAGCTGCAGAGGTATCTTCCTTGTAAAGATGCTTTGTGAGGTTGCTGCTCCCATCAATCTGCTCAGTAAAAATAGCTCATCTTGTAATGGAGGGGAAAGTTCCAGTCGCAGCGCTGAAAAGCGATCAGCTGAAGACGAAGCTGCAGACCTCCCAACAAAGCCTACAAAGATGTCCAAGTTTGGATTTGCCATAGGTAGTCAGACAGCAAGGAAAGCATCCGCCATCTCCATTAGACTCGGAGCAAGTAAGCCTAAGGAAACAGTTCCAACTCTTGCTCCAAAAACTCTTTCAGTAGCAGCAGCTTTCAATGAAGATGAAGATAGTGAGCCGGAAGAAATGCCTCCAGAAGCGAAGATGAGGATGAAGAACATCGGAAGGGACACGCCAACATCAGCCGGACCAAACTCCTTTAATAAAGgaaagcatggcttttccgataaccagaagctgtgggagcgaaatatcaaatctCATCTTGGAAACGTCCACGACCAAGACAATTAAGAGAAGTGTTCTGAGATTGGGGTGTGGGCGGGTGCATTAGAAGGAGCAGTCAGCCTCCTTTTTGTAAAGAATGGTGTAAGACTAGCTTTGGAGCCGtttttctttcttcttttttcttttccttttttctttttttttttttAAGATTGAGTGGTACACTAATAAATGAGAGTTTGCAATTAGAGGTAATTTATGTTTTATATACAGATTTCAAGACATTTGCTAATTTTGTAGTTTCACATGATTAGTTTCCAAGGGTTACAGATAATAAAGAAATCAGAAGTGGTACCTTTCTAAGAATTGCATATTTTTTTAGACACAACTATTAGCACATTAAGAGGGAAGCCAAAAGTTATTGCCTACTTCAAAGTGAAAGCAGTTCCTCTCCTGACTTCTCCCCCACATTACCTGACTGTCTGTCTGGCTCCCTGGAACAGCCTTACGAGAGGGAATTGGATTGAGAAGACAATTGTTACTGGACTATTGACTGAAAGTAAATTTAGATACAATTAAAATAAACCTTTTCCTATGGGCATTTCACCTTGTTCTGGGCCATTATATGCTAGTACTGCTTCGCTATCAGTACAGACGCTTTGCTCTTTAAAAACTTTTTTCGTTAAAAATTCTTGTATGAAGTATTGAGTATTATAACTAGCCCACTTTAATGGAGGTTGTCTCCCTTCAGGATTCTTCAAAGGACACTATTTGCTACCAAAGTGAATCAGTATTTGAATGTGCTTCTCTTGGTTTCTATTCTAGTTCCTATAATCATTTCCACCAGAACTTGAGGCAAGACATAAGGAAGCTGTTTCTTTTAAAGTACAAACCGCTGAAAACATCAGTGTGCGCACTGCTTAAGTATTTGGCTGGCTTTTATTTTTTAAAAGGTTTAAATACCAAAAGAGGAAAAGGGTGTAACGTGGTGTGAAGACAGGTGAGGCAGCTCACCCGTGACTTTTGAAGCATTTAAGTTACTGACTTACTAGATCCAGTTTTGAACTGAATTCACACGATTTCTTATTTGTACAACTCCATGGTTTATTTTAAGTATGTACATACTGAGCAGTGGTTTCAAAAGCACATTTAGTGACTGAAATGGGACAGAAATGCTTCTTCAGACACACTTTCATTGTGAGTCTCTCATCGCATATGCTCTTAGATTTCTGTATCTAGGGTGTTTGTTTTGTATTTTTTGTATCGTATATGGGCTTTTTAAACGTGACAGTTAATGCATCTTTAATAGTCACAGACTAAAGAAATGATAAAATGTCCTTGAAAATGACAATGTTAAGTTTGGAGGCGGCTTGGGTGAGTTTCATGGGTGGTGATGATTCACTAGGCAATTTTTACTGTAATGACTTCCGAGAAGCAGCCTGCGGGTGTACCTGACACGTTCACTACATTGAGTCCACTTAGTAAGCCCGAGTACACGATGGGAATGTACATTAGCACTATTAGTTCATACATGATTTAAGTATATCAAGATACATACATTTACCTTTTACGTCTGCAAACTGTCCTGTGGCCATTTTACTGTTTGTTGAAATAACACCTCTCCTACATGTTCTTTACTTGACTGGAAGAACAGTTAACCTGAGGTCAAGATGGAGAGACGACTAAGCTAAGTGTCTTTACTAAAACTACAATAAATTTTGTCAAACTTGG