Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cct6a
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name chaperonin containing TCP1 subunit 6A
Also known as -
Coordinate chr12:30491584-30501813
Strand -
Gene summary Predicted to enable WD40-repeat domain binding activity; protein folding chaperone; and unfolded protein binding activity. Predicted to be involved in several processes, including positive regulation of protein localization; positive regulation of telomerase RNA localization to Cajal body; and positive regulation of telomere maintenance via telomerase. Predicted to act upstream of or within binding activity of sperm to zona pellucida and toxin transport. Predicted to be located in several cellular components, including acrosomal vesicle; cell body; and microtubule. Predicted to be part of chaperonin-containing T-complex and zona pellucida receptor complex. Orthologous to human CCT6A (chaperonin containing TCP1 subunit 6A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cct6a

Retroname Coord Strand Genomic Region ENSG
Cct6aP1 chr1:71960982-71961636 - Intergenic
N/A UCSC
Cct6aP2 chr5:572677-574705 + Intergenic
N/A UCSC
Cct6aP3 chr5:76057402-76059383 - Intergenic
N/A UCSC
Cct6aP4 chr6:84117374-84118993 + Intergenic
N/A UCSC
Cct6aP5 chr8:33074212-33077943 - Intergenic
N/A UCSC
Cct6aP6 chr9:101224964-101226951 + Intergenic
N/A UCSC
Cct6aP7 chr9:58225453-58227039 - Intergenic
N/A UCSC
Cct6aP8 chr10:87655456-87657447 + Intergenic
N/A UCSC
Cct6aP9 chr13:81235752-81236876 - Intergenic
N/A UCSC
Cct6aP10 chr14:65269741-65270389 - Intergenic
N/A UCSC
Cct6aP11 chr18:36364252-36366214 - Intergenic
N/A UCSC
Cct6aP12 chrX:37095800-37097765 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001033684.1
CCCTGAGCTCGACCAGCCATGGCGGCGGTGAAGACCCTAAATCCCAAAGCCGAGGTGGCCCGGGCGCAGGCAGCGCTGGCGGTGAACATCAGCGCGGCACGGGGCCTGCAGGATGTTCTGAGGACCAACTTGGGCCCTAAAGGCACCATGAAGATGCTTGTATCTGGTGCTGGAGACATCAAACTTACTAAAGATGGCAATGTGCTACTTCATGAAATGCAAATTCAACACCCAACAGCCTCTTTGATAGCAAAAGTGGCTACAGCGCAGGATGACATAACCGGCGATGGCACTACATCCAATGTCCTCATCATCGGAGAGCTGCTCAAACAAGCGGACCTCTACATTTCTGAAGGTCTCCATCCCAGAATAATAACCGAAGGCTTTGAAGCTGCAAAGGAAAAGGCACTCCAGTTTTTGGAACAAGTCAAAGTAAGCAAAGAGATGGACAGAGAAACACTCATCGATGTGGCCAGGACATCTCTGCGGACTAAAGTTCATGCTGAGCTTGCAGATGTCTTGACAGAGGCTGTGGTGGACTCCATTTTGGCCATTAGGAAAAAAGATGAGCCCATTGACCTCTTCATGGTTGAGATCATGGAGATGAAGCATAAATCTGAAACTGATACAAGCTTAATCAGAGGGCTTGTTTTGGATCATGGAGCACGGCATCCTGATATGAAGAAAAGAGTAGAAAATGCCTACATCCTCACATGCAACGTGTCCTTGGAGTATGAGAAGACAGAAGTGAATTCTGGGTTTTTTTACAAGAGTGCAGAAGAGAGAGAGAAACTAGTAAAGGCTGAAAGAAAATTCATTGAAGATAGAGTTAAAAAAATCGTAGAACTGAAGAAGAAAGTCTGTGGTGATTCAGATAAAGGATTTGTCGTTATTAATCAAAAGGGGATTGACCCCTTCTCTTTAGATGCCCTCGCGAAAGAAGGCATCGTAGCTCTGCGCAGAGCCAAGAGGAGAAACATGGAGAGGCTGACTCTTGCTTGTGGTGGGATAGCTCTGAACTCCTTTGATGACCTGAATCCTGACTGTTTGGGACATGCAGGGCTTGTCTATGAGTATACATTGGGTGAGGAGAAGTTCACCTTTATTGAGAAATGTAACAATCCCCGTTCTGTCACTTTACTGGTTAAAGGACCAAACAAGCACACGCTGACTCAGATCAAGGATGCAATCAGAGATGGCTTGAGGGCTGTCAAAAATGCTATTGATGATGGCTGTGTTGTCCCGGGTGCAGGTGCAGTTGAAGTGGCACTGGCAGAGGCTCTGATTAAATACAAGCCCAGTGTGAAGGGCAGAGCTCAGCTTGGGGTCCAGGCATTTGCAGATGCCTTGCTCATCATTCCCAAGGTTCTTGCGCAGAACTCTGGTTTTGACCTTCAGGAAACATTAGTTAAAGTTCAAGCTGAACATTCAGAATCCGGTCAGCTTGTGGGTGTGGATCTAAACACAGGTGAGCCAATGGTGGCCGCAGAAATGGGTGTGTGGGATAACTACTGTGTGAAGAAGCAGCTGCTTCACTCCTGTACTGTGATCGCCACCAACATTCTCCTGGTTGACGAGATCATGAGAGCTGGGATGTCCTCTCTGAAGGGCTGAAGTCTGCCTGGGATGCTACAGAATGTTGGGGGGGGGGGGGTTGTCCAAGCTTCAAGTGATTTGGAAAAGAATTTTCTCTTCCTGATTGGAGAAAAGGAACAGGACATTTGGCACCTATTCAAATTATAATACTGTAAATTTTATTTAATTTTTTTTTGCATTGAGTGAATACACTTAAAGCAGGTCTTTTTAAATCCACTGAACAAGATGTTTTCGTTACAGTGATACAAAATTACATAATAAGCATTGTTGTCTACCTTGTTCCTCAAGTGTTCTTTGAAATTTTATAATGGTTTTCTCCTAAATAAggcatggcgattcctgcctgtaagcctagcactttggaaataaagtcagaagttctgcaccaa