Summary

Gene Name	Cc2d1a
Specie	Rattus norvegicus
Full Name	coiled-coil and C2 domain containing 1A
Also known as	RGD1306108
Coordinate	chr19:25246912-25261965
Strand	-
Gene summary	Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of snRNA transcription by RNA polymerase II and positive regulation of I-kappaB kinase/NF-kappaB signaling. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II. Located in nucleus. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability and intellectual disability. Orthologous to human CC2D1A (coiled-coil and C2 domain containing 1A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cc2d1a

Retroname	Coord	Strand	Genomic Region	ENSG
Cc2d1aP1	chr5:158087681-158088141	-	Intergenic	N/A	UCSC

Expression

Transcript Sequences

>NM_001013869.1

CGGAAGCTGGGCGGCCAAAAGTCGAGAATCCCAGGGGCCGGTCGCAGAGAAGGAACTCGGGGCTCAGGCACAGCGCGAGCTCTGAGACGCGACTTCGGTGAAGAGGCAAGGCAAGGCAAAGGTGCAGGGGCTGGTAGTCCGGGCTTCGAGCCTGGAAGATGCACAAGAGGAATGGACCCCAGGCACCCCCGGGCCGAGGTGCTGTCACCGCCCGCCAGCTTGGTCTGCTGGTTGACTTCTCCCCAGATGGCCTGATGATCCCTGAGGATGGGGTAAATGATGAAGAATTGGAGGCTGAATTCCTGGCTTTGGTGGGGGGTCAGCCCCAGGCCCTAGAGAAACTGAAAGGCAAAGGTCCCCTGCCAATGGAAGCCATTGAGAAAATGGCCCGGCTCTGCATGAGAGACCTggatgaggatgaggaggggacagatgaggatgtggaggctgacgaggaCCTGCTGGCAGAGCTAAATGAGGTCCTTGGAGAAGAAAGGAAGGCTGTGGAGCCCGCGATGCCTGTGGTCCAGACGCTGGAAAACCTGCTGGTCTCTGCAAAGAAGGGCAACACCATCAATGAAGCCGATATTCCACCACCTGTAGCCTCGGGGAAGGGGCCAGCAATTGGGCACAGCCACACCCACACTACTTCCCACCTGGCTCCTGTAAGCCCGCCAGCCCCAGAGCCCAGCGTCACCTTGGAGGCCCCATCTACCACTGCACAAACCTCTGCTAAGCCCCAGCTATCCCCAGATCCCTGCAGCCCCCTTGCCCGGTTGCAGAGCCTCCAGCATGAGTACAAAGTGGCTGCTCTCAGAGCCAAGCATCAGGATGACACTGCTACAGCCGCCAGATACTTGAGAGTCTCGAAGAGCTTTGACCCTGTCTTGGAGGCCCTGAGCCGAGGGGAACTGGTAGACCTGTCCCGCCTGCCCCCTCCACCTGACCAGCTGTCCCCAGAGCCCCCCTTGCCAGCAGCCCAACCTGTGACTCCTGCCTCAACACTCACCAGGCCAGAGGTTCCCCAGCCCCCGAAGAACCTCCTGGAGGCGCTGGAGCAGCGAATGGAGCGGTACCACGTGGCTGCAGCCCAGGCCAAGGCCAAGGGTGACCAGAGGAAGGCACGCATGCACGAACGAATTGTCAAGCAATACCAAGATGCTATTCGAGCCCACAAGGCAGGCCGAGCTGTGGATGTGGCTGAGCTCCCAGTGCCCCCAGGCTTCCCCCCAATTCAGGGCTTGGAGTCTGCGGAGCCTTCTCAGCAGAGCCTGGTGGGAGTCCTAGAAACCGCCATGAAGCTTGCCAACCACGAAGAAGGCTCAGATGAGGAAGAGGAAGAGACTCCAAAGAAGAACACCCCTGCTGCCTCCACAGCCCAGCCGAAGGCCTCGCCCTCCAGGGCACCTCCATCAGGACCAGCCCCAGCAGGCAAAGCTGCTTCCAAGGGCACCTCCACCAGGGCCCAGCAGCAGCTGGCCTTCCTGGAGGGCCGTAAGAAGCAGCTCCTTCAGGCTGCGCTGCGCGCCAAGCAAAAGAACGACGTAGAGGGCGCCAAGATGCATCTGCGCCAGGCCAAAGGGCTGGAGCCCATGCTAGAGGCCTCCCGCAATGGACTGCCTGTGGATATTGCCAAGGTGCCACCTGCTCCTGTCAACAAGGATGATTTTGTGCTGGTCCAGCGGCCTGGCCCAGGCATGTCTCAGGAGGCCGTGCGTCGCTATGGGGAGCTTACCAAGCTCCTGAGACAGCAACATGAAATGTGTCTAAACCACTCCACACAGTTCACCCACCTGGGCAACATTGCTGAAACCATTAAGTTCGAGAAGCTGGCAGAAGACTGTAAGCGGAGCATGGACACCTTAAAACAAGCCTTCGCCCGCAGTCTGCCCACACCTGCAGCCCGCTTTGAGCAAAGGACCTTCAGTGTCATCAAGATCTTTCCGGACTTGAGCAACAACGACATGCTCCTGTTTATTGTGAAGGGCATCAACTTGCCCACACCCCCAGGACTGTCCCCCAGTGACCTGGATGCCTTTGTCCGCTTCGACTTCCCTTATCCCAATGTGGAGGAAGCTCAGAAAGATAAGACCAGCGTGATCAAAAGCACAGACTCCCCTGAATTCAAGGAGCAGTTCAAACTCTGCATCAACCGTGGCCACCGTGGCTTCCGAAGGGCCATCCAAACCAAGGGCATCAAGTTCGAAGTGGTCCACAAGGGGGGATTATTTAAGACTGACAGGGTGCTGGGGACAGCCCAGCTGAAGCTGGATACATTGGAAACAGCTTGTGAGGTCCACGAGATCCTGGAGGTTTTGGATGGCCGCCGGCCCACAGGGGGTCGCCTTGAGGTGATGGTCCGCATCCGGGAGCCACTGACAGCCCAGCAGTTGGAGACTACAACTGAGAGGTGGCTGGTCATTGATCACATCCCAGCAGCTGTGCCCACTGTCACTGGGCCCAAAGCAAAGGTTCCTCTCATACCTGCGTCTTCAAAGGAAGCAGGCAACAGATCATCACGGCCCCTGCATAGCCTTAGTGTGCTGGCCTTTGACCAAGAGCGGCTAGAAAGGAAGATCCTGGCCCTGAGGCAGGCACGCCGGCCTGTACCTCCAGAAGTGGCCCAGCAGTACCAGGACGTAGTACAGCGTAGCCAGTGGCAGAGGGCACAGCTGGAGCAGGGAGGTGCTGCCCTCCGCAGGGAGTATGCAAGCCATCTGGAGCGCCAGCTGCACTTCTATACAGAGGCTGCCCGGCGCCTGGGCTATGACGGAAGCAGGGAGGCCGCGAAGGAGGCATTGTACCGGCGGAACCTGGTGGAGAGTGAGCTGCAGCGACTCCGCAGGTGAGGCCCATCCTGGACCACAGCCTGATGCCAGGCAGAGCTCCAGGGCCACCGAAGAGACAAGCAGACAATCAGTGGACAATCAGTGGTTCTGGGCTCCCCCTGTCCGGGCCCCCGGCCCTAGGGGCATCAGGACAGCACCTCACCCCAGCCTGGCTGGTCGGGCCTTGGAGAGTCCTGTTTGCACATCCAGGAGCGTCTGGAGCAAGGAGAGTAGCTAGGACACGAGCCCAGAGGGCCCTGCAAGCACTTTACTTCCTGCCCTTCCCATCGTTGACCCCAAAGATACCTCTGAGGCTGTCAAGCTCAGCTGACTCTCTAAGGACTGTGCTGACCCCGCTGCCCCTCACCCCCAGGGCCAACACAGAATGAACAGCCAAGGCCA