Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Trir
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name telomerase RNA component interacting RNase
Also known as RGD1564093
Coordinate chr19:26142720-26146136
Strand +
Gene summary Predicted to enable 3'-5' exonuclease activity and 5'-3' exonuclease activity. Predicted to be involved in RNA phosphodiester bond hydrolysis, exonucleolytic and rRNA catabolic process. Orthologous to human TRIR (telomerase RNA component interacting RNase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Trir

Retroname Coord Strand Genomic Region ENSG
RGD1564093P1 chr8:23206969-23207723 + Intergenic
N/A UCSC
RGD1564093P2 chr9:38761112-38761867 + Intergenic
N/A UCSC
RGD1564093P3 chr14:108069464-108070264 - Intragenic
N/A UCSC
RGD1564093P4 chrX:116557650-116558139 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001105946.1
GTCCCGCGCCAAGCGCGCGGTGTGAGAGCCTTTCCCGAAGTCCTTTGCGCGGCATCTGGCCACAAAATGGCTGCCCGAGGGAGACGGGCGGAGCCTCCGGGTCGGGAGGCGCCCGGCCCGGCGGGCAGCGGCAGGAGCCGATGGGCTGAGTCGGGGCCGGGAACATCACCCGAGAGTGGGGATGACGAGGTGTCGGGCTCAAGTCCGGTGTCCAGCGGTGTGAACTTGTTTGCCAACGATGGCAGCTTCCTGGAGCTGTTCAAGCGGAAGATGGAGGAGGAGCAGCGGCAGCGGCAGGAGGAGCCACCCCCGGGCCCGCAGCGACCTGATCAACCGGCCTCCGCCGCAGCGGGCCCAGGGAATCAGAAGAGGAAGGGCGGCCCAGGCCCCACGTTCAGCTTCGTGGGCAAGCGCAGAGGCGGGAACAAACTAGCCCTCAAGACGGGAATAGTAGCCAAGAAGCAGAAGACGGAGGATGAGGTATTAACAAGTAAAGGTGACGCGTGGGCCAAGTACATGGCAGAAGTGAAAAAGTACAAAGCCCACCAGTGCGGTGATGATGATAAAACTCGGCCCCTGGTGAAATGACCCCCCGGGTGCTCACTACCTGGGACTCCGAGATGTACATAATATTTAATGCGGTAACGGCAGCAGCCTTCCTGGAGGACTGATACACAGAAGGAAACCCAGGCGCTTCCCGTGGCCGCAGACCATTCTCCAGGACTCTTTTTTACCTTGAGCACTTGCCTCCTGAGACTTACTAGACCAGCGGTTTACTGTGCCCTTTCTTCCCATCACCTTGctctctctggctctgtctgtctcttcttgctgtctctcCTTTTAGCAGTCACTTCTGAGAAGTAAAGAACCTGACTTAGTGCTGGAA