Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name C1d
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name C1D nuclear receptor corepressor
Also known as RGD1560600
Coordinate chr14:100415645-100427878
Strand +
Gene summary Predicted to enable nuclear receptor binding activity; nucleic acid binding activity; and transcription corepressor activity. Predicted to be involved in maturation of 5.8S rRNA and regulation of gene expression. Predicted to act upstream of or within negative regulation of transcription, DNA-templated. Predicted to be located in nucleoplasm. Predicted to be part of exosome (RNase complex) and transcription repressor complex. Predicted to be active in nucleolus. Orthologous to human C1D (C1D nuclear receptor corepressor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from C1d

Retroname Coord Strand Genomic Region ENSG
C1dP1 chr6:126672253-126673302 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001106021.1
AGACCGGGAACGACGCATGCGCGGGAGGAAAAAAAACCGTGTCATGGCGTCATCATTGCGCGACCTCTTTTCCGGAGACAGGCGTCCACGGTATTGAGTTGGTCACAATGGCAGGTGAAGAAATGAATGAAGACTATCCCGTAGAAATTCACGATTCTTTAACAGCTCTGGAGAGCTCCCTGGGGGCGGTGGATGACATGCTGAAGACCATGATGTCTGTTTCTAGAAATGAGTTGTTGCAGAAGTTGGACCCACTGGAACAAGCAAAGGTGGATTTAGTTTCTGCATATACATTAAATTCAATGTTTTGGGTTTACTTGGCAACTCAAGGAGTTAATCCCAAGGAGCATCCAGTGAAGCAGGAGTTGGAAAGAATCCGAGTCTACATGAACAGAGTTAAAGAAATAACAGACAAGAAGAAGGCTGCCAAGCTGGACAGAGGGGCCGCGTCGAGATTTGTCAAAAATGCACTCTGGGAACCCAAACCAAAAAACACACCAAAAGTGGCTAATAAAGGGAAAAGTAAACACTAATAATCTTTTGGTTTTGATGTACGTGTTTTCAAAAAGTACATCATTTTTATCAGTTTACAGTGTACTTATGTGACCATGTGGTGTTTAAATGGATTCCTTTTTGAATTCATGTATAAATTTACACATTAAATTTTGTGATACTGAATCTTTTTTTTTTGCTGAGAAAGATTAAGTTGTCGTTATTGATTTTCCTATAAAGCATCATGATGTTTTAATATTGAAAGATATTCTATAAGCAATTGTGAAATCCAAATGTTCTTTGTAAACGTTTGTAGTGTTTTAAATGTAGTGTTATGATGAAGTGTGCTGTCTGTAGACTGGAGTTGTTAGAGGACATCTGTTTTCACAATGATGAGAAATGTAATGACTTAAATACCCACTCTGGTTTCTGTTCAGTTAGTTCAACATGTTTCTGTGAATTTTTTTTTAGGAGTAATTGCTGTCTTGATGTTCACAGTACAAAATTGAAACCTTCAGGCTGTATTTTAATTCTTCATGTTCCATTTAAAATAAAATATTCTCATTCATTAATGCTGATGGAAAATAGGATGTATGTCCTGGTTGGAGTTGGCTTGATTCCCTTTTAATAAATACTGTAGCTGTGTAGCTCACTTGTCTCTTGCTGTCCATTGCATGAGTGAACATGACCTCCAGATGAGGCTGTAAGCAGCCCCACCCACTCGCTGCACAACATTTATGAGTCACGGTCCTCTGTTCTTCTCTTGGTCTCACTCTTGTAGAAGCTTTCTGACTAAATATTTCCTGAGCCACATGGCTGTTTTGAACCATCTTCTTTATTAAATACTGCCCCTTAGGCACAGGAGGAATCAAATTATATTTGCATTCTGAGTTATTTTTCCAGAGTGTCTGTTATGATGAATTCCACTTATTAAACCTTTTAAGTGTCTGAGCTCATATGATCTTGCTTCTCTAGGCCCACACTGTCGTGTGTAGGAATGCCAAGGGTAGCCAGGTTTTATCGTTTTTGAGAATTAGAGTTGTTGAAATTGTCCATGATTAATTTTTCACAACTGACTTTGAATATATGAATTTCTTGATTAGGTAGCAGATACTGGAAATGGTCTGAAGTTATAATGGACTTTGTAAAGCATGCTAAATTCATAAAGAGTAAGTCACTAGTAGACGCAGAAAGCCTCAGCTCTGTCGTCAGACACTGCGAGGTGGAAGGATACTTGCGAGCATTTGTAGTCATTGCATTCTGGGCCGTTTTAATTCTCTGATAATAGCAAAAGTAACTTCAGTAGAGAAGTAAGTGCTTCACGAAGATAACCGTAGAGTGCATTCTTAATGTTAGTCATTGCAAGGAAACTTGTATCTCGTATTTCTCTTTTTAAATTTCATAAAGAAAAGAATTTGTAATGAAAATTTTCACAGTTGCAGAAAATCATTAACCAAGGCACTTGTTTGTGAAAGTCCAGCTCTGTATCCCACTAAATTGGATACCCTCAACTATTTCTTTCAGCATGTATTTGTAGAAATACAATATTTTGAGTCTATTCCATTTTATTACCTAGAATTTGAAGTAATTACTTGAACATACCAAGCAGCTGAACGGTGGTAGTTTATTAGGTTGTCTGTCACAGGTGCGCTCACTGACGTCCACGTTGCCAAGCACTGTGCTCCATTCTGGGTTTCAGAGATGGTGTGTGTAGCCCTTGTGCTGTTTTCCTGAAGTGTTACTAGTTTAGGTAGTATTTCAGAGTGCCCAGAAGTTATAGGAATTATCCTCGCTGGCCTCAGCCAGAACGATACAAGGTGGTGAGCTGAGTATTAAGTGTGGAGTGGTTATTGGGAACACTATTCCAGGTGATGCTGTTCTGTAAGGGGAGGTGTTAGCTGTATGTTTTATTAATCTTCTTGGGAATCAACACTTTGGAGGAATTGCAGATGTGTAGTCATTGATCTAAATGAAGTCTTTTAATATTTTAAATAAAAATTTCTTGTTCACAGATACAAAGTGGGAGGTAGACTATGTTATATGAAAATTTTTAAGATTAAATCACGGTTTATATTTCTGGGATTAGGCCGTATCAAGTAAATGGGTTTTTAAGAAACTGAAGTATAAAATCTACTTACGTTACTAAAGTGGCCTACTCCAGCTTTTAAAATTGTTTAGAGGCATGAATACTTCAAAAAAAAAAAAAAAGGACACTACTGAACGTAGACCCTTTTTTCTTAAGTGGTTATTGAAAAAAATACTTTGGAACTGATCACTTGCAATTCTATTACATTAAAGTTTAATACAACAAATTCCTAGAGCTTGTGATTTTTTCAAAGTATTACTAATTGAGAAAGATTTGGGTGTGATTCCTAACATTTGTTAAAGAACAGGAAGCAAAAGAAGCCCTGGCCCTCACAGCAGAGTGACTGAGCTTGTCCAGATGCTTCAGTGGTTCTCCTAATGGTCTTGACAGAGTCCAGATGCTTCAGTGGCTCTTCCTCGTGATCTCAGTGGCTTCCCGGCTTGTGTGGATACGCAGTGGATATACTTTACTGCTGTGAACATGCATGCCTCTTTCCTCCCATTCTAATTTAAGACTTGAGTGTTGGAATTACAAACCATAAGTCGTTTAGT