Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Spcs1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name signal peptidase complex subunit 1
Also known as RGD1309125
Coordinate chr16:7080389-7081957
Strand -
Gene summary Predicted to enable ribosome binding activity. Predicted to be involved in several processes, including protein targeting to ER; signal peptide processing; and viral protein processing. Predicted to be part of signal peptidase complex. Predicted to be integral component of endoplasmic reticulum membrane. Orthologous to human SPCS1 (signal peptidase complex subunit 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Spcs1

Retroname Coord Strand Genomic Region ENSG
Spcs1P1 chr14:107765404-107765573 - Intergenic
N/A UCSC
Spcs1P2 chr15:28863137-28863577 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001131006.1
GCTTCCGGGGCCACAGCCGAAGAGAGGCGCTTGGCTGGTCGGCCTGGCTGCTTTCGGTATCGCACTTCGCAAGCCACACTCCTTAATAGTCAGCTACCTTCGTTTCACTGTCGGTATCAGTCTTCGGCAACCATGCTGGAACACCTGAGCTCGCTGCCCACCCAGATGGATTACAAGGGGCAGAAGCTAGCTGAACAGATGTTTCAGGGAATTATTCTTTTTTCTGCAATAGTTGGATTTATCTACGGGTATGTGGCTGAACAGTTCGGGTGGACCGTCTACATAGTTATGGCTGGGTTTGCTTTCTCGTGTTTGCTGACACTTCCTCCGTGGCCCATCTACCGCCGCCATCCCCTGAAGTGGTTACCTGTTCAAGACTCAGGCACAGAAGACAAGAAATCAGGGGACAGAAAAATTAAGAGGCATGCTAAAAATAACTGATTGGGACTTTCACGATTCAGCACCTGCTTTTTGTTTCCTGTAAGATGGCTGGATTGCTTTCATAACCAAAACAGCTTAAACCACCTATGTTCTTACAGCACAGCTGTGTGGAGATGTAGTTGTCCTGGCTTCCTTTCTAACCGGCATTATTTTAAGTCATAACTATTTTATACTGTTCTTCGTAAGCTTGTTTTGGAGAACCGGACATACAGGTATATGTCGCTTCTTTCATGTGTGCAGTGAATAAACACCTCATAACTCCTA