Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl17
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L17
Also known as ASI|rpL23
Coordinate chr18:70969733-70972839
Strand +
Gene summary Enables large ribosomal subunit rRNA binding activity. Involved in cellular response to amino acid starvation and positive regulation of G1/S transition of mitotic cell cycle. Located in A band and nucleus. Part of cytosolic large ribosomal subunit and polysome. Orthologous to several human genes including RPL17-C18orf32 (RPL17-C18orf32 readthrough). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl17

Retroname Coord Strand Genomic Region ENSG
Rpl17P1 chr1:107068177-107068507 - Intergenic
N/A UCSC
Rpl17P2 chr1:144630550-144630690 + Intragenic
N/A UCSC
Rpl17P3 chr1:154235992-154236589 - Intergenic
N/A UCSC
Rpl17P4 chr1:238044503-238045092 - Intergenic
N/A UCSC
Rpl17P5 chr1:239847792-239848384 - Intragenic
N/A UCSC
Rpl17P6 chr1:267266443-267267038 + Intergenic
N/A UCSC
Rpl17P7 chr1:280712130-280712457 + Intergenic
N/A UCSC
Rpl17P8 chr1:6367077-6367644 + Intergenic
N/A UCSC
Rpl17P9 chr1:84397340-84397718 - Intergenic
N/A UCSC
Rpl17P10 chr2:113518856-113519433 + Intergenic
N/A UCSC
Rpl17P11 chr2:206862063-206862656 - Intergenic
N/A UCSC
Rpl17P12 chr2:2141696-2142272 - Intergenic
N/A UCSC
Rpl17P13 chr2:243075055-243075323 + Intergenic
N/A UCSC
Rpl17P14 chr2:257394296-257394623 + Intergenic
N/A UCSC
Rpl17P15 chr2:36490559-36491166 + Intergenic
N/A UCSC
Rpl17P16 chr2:4236100-4236670 + Intragenic
N/A UCSC
Rpl17P17 chr2:48197331-48197621 + Intergenic
N/A UCSC
Rpl17P18 chr2:60844712-60845317 - Intergenic
N/A UCSC
Rpl17P19 chr2:94496063-94496402 - Intragenic
N/A UCSC
Rpl17P20 chr2:9512497-9513001 - Intergenic
N/A UCSC
Rpl17P21 chr3:105302716-105303280 - Intergenic
N/A UCSC
Rpl17P22 chr3:112265176-112265526 - Intragenic
N/A UCSC
Rpl17P23 chr3:113658739-113659339 - Intragenic
N/A UCSC
Rpl17P24 chr3:151211644-151212377 + Intragenic
N/A UCSC
Rpl17P25 chr3:175911651-175912241 + Intergenic
N/A UCSC
Rpl17P26 chr3:90826978-90828101 + Intergenic
N/A UCSC
Rpl17P27 chr3:94832820-94833429 - Intergenic
N/A UCSC
Rpl17P28 chr4:119618553-119618974 - Intragenic
N/A UCSC
Rpl17P29 chr4:133680307-133680820 + Intergenic
N/A UCSC
Rpl17P30 chr4:150449774-150450376 + Intragenic
N/A UCSC
Rpl17P31 chr4:151758247-151758579 - Intergenic
N/A UCSC
Rpl17P32 chr4:157026340-157026934 - Intergenic
N/A UCSC
Rpl17P33 chr4:79018301-79018892 + Intergenic
N/A UCSC
Rpl17P34 chr4:92856948-92857517 + Intergenic
N/A UCSC
Rpl17P35 chr5:110213465-110214071 - Intergenic
N/A UCSC
Rpl17P36 chr5:119841055-119841459 + Intergenic
N/A UCSC
Rpl17P37 chr5:154678990-154679578 + Intragenic
N/A UCSC
Rpl17P38 chr5:27563585-27564185 - Intergenic
N/A UCSC
Rpl17P39 chr6:119512279-119512664 + Intergenic
N/A UCSC
Rpl17P40 chr6:125746157-125746624 + Intragenic
N/A UCSC
Rpl17P41 chr6:19947642-19948204 - Intergenic
N/A UCSC
Rpl17P42 chr6:59662344-59662938 + Intergenic
N/A UCSC
Rpl17P43 chr6:8298934-8299380 - Intragenic
N/A UCSC
Rpl17P44 chr7:11760462-11760887 - Intergenic
N/A UCSC
Rpl17P45 chr7:42088905-42089516 - Intergenic
N/A UCSC
Rpl17P46 chr8:47626630-47627217 - Intergenic
N/A UCSC
Rpl17P47 chr8:49565411-49566125 + Intragenic
N/A UCSC
Rpl17P48 chr8:58174852-58175463 + Intragenic
N/A UCSC
Rpl17P49 chr8:60839390-60839946 + Intergenic
N/A UCSC
Rpl17P50 chr8:71881021-71881629 - Intragenic
N/A UCSC
Rpl17P51 chr8:75834788-75835106 - Intergenic
N/A UCSC
Rpl17P52 chr9:85315197-85315787 + Intergenic
N/A UCSC
Rpl17P53 chr10:110249478-110250046 - Intergenic
N/A UCSC
Rpl17P54 chr10:34105067-34105681 - Intergenic
N/A UCSC
Rpl17P55 chr10:40089407-40089779 - Intragenic
N/A UCSC
Rpl17P56 chr10:46923494-46924233 - Intergenic
N/A UCSC
Rpl17P57 chr10:55602457-55602717 - Intragenic
N/A UCSC
Rpl17P58 chr10:59242212-59242820 - Intragenic
N/A UCSC
Rpl17P59 chr10:71494086-71494524 - Intergenic
N/A UCSC
Rpl17P60 chr10:87922146-87922283 - Intergenic
N/A UCSC
Rpl17P61 chr10:95642610-95643223 + Intragenic
N/A UCSC
Rpl17P62 chr11:36519646-36520213 - Intragenic
N/A UCSC
Rpl17P63 chr11:5373969-5374137 + Intergenic
N/A UCSC
Rpl17P64 chr11:57048374-57048550 + Intergenic
N/A UCSC
Rpl17P65 chr11:59971033-59971576 + Intergenic
N/A UCSC
Rpl17P66 chr11:73708939-73709544 - Intragenic
N/A UCSC
Rpl17P67 chr11:80705211-80705798 - Intergenic
N/A UCSC
Rpl17P68 chr12:37563665-37563983 + Intragenic
N/A UCSC
Rpl17P69 chr12:51669168-51669389 + Intragenic
N/A UCSC
Rpl17P70 chr13:104494782-104495377 - Intergenic
N/A UCSC
Rpl17P71 chr13:78049823-78050277 + Intragenic
N/A UCSC
Rpl17P72 chr13:79272687-79273295 - Intragenic
N/A UCSC
Rpl17P73 chr13:96246683-96247301 - Intergenic
N/A UCSC
Rpl17P74 chr14:108620797-108621405 + Intergenic
N/A UCSC
Rpl17P75 chr15:34527990-34528595 - Intragenic
N/A UCSC
Rpl17P76 chr15:61479018-61479615 + Intergenic
N/A UCSC
Rpl17P77 chr16:79215145-79215609 + Intergenic
N/A UCSC
Rpl17P78 chr17:26678346-26678866 - Intergenic
N/A UCSC
Rpl17P79 chr17:33417109-33417673 - Intragenic
N/A UCSC
Rpl17P80 chr17:37429082-37430352 + Intergenic
N/A UCSC
Rpl17P81 chr18:29556193-29556801 - Intergenic
N/A UCSC
Rpl17P82 chr19:16836452-16836964 + Intragenic
N/A UCSC
Rpl17P83 chr19:59267501-59268116 - Intragenic
N/A UCSC
Rpl17P84 chr19:59917915-59918530 - Intergenic
N/A UCSC
Rpl17P85 chr20:27168768-27168970 + Intragenic
N/A UCSC
Rpl17P86 chr20:43931818-43932039 + Intragenic
N/A UCSC
Rpl17P87 chrX:44463491-44464089 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_201415.1
CTGTTAGCGGCCAGAGGTGACCTGTGAAGATGGTTCGCTACTCCCTTGACCCAGAAAACCCCACGAAATCATGCAAGTCAAGAGGCTCAAACCTTCGTGTTCACTTTAAGAACACCCGGGAAACTGCCCAGGCCATCAAGGGTATGCATATCCGCAAAGCCACCAAGTATCTGAAGGATGTCACTTTAAAGAAGCAGTGTGTGCCATTCCGGCGGTATAATGGTGGAGTTGGTAGGTGCGCCCAGGCCAAACAGTGGGGCTGGACACAGGGACGGTGGCCAAAAAAGAGTGCTGAATTTTTGCTGCACATGCTTAAAAATGCAGAGAGTAATGCTGAACTTAAGGGTTTGGATGTAGACTCTCTGGTCATTGAACACATCCAGGTGAACAAGGCTCCTAAGATGCGCAGACGGACCTACAGAGCTCACGGCCGGATTAACCCATACATGAGCTCCCCCTGCCACATCGAGATGATCCTCACTGAGAAGGAACAGATTGTTCCAAAGCCAGAAGAGGAGGTTGCACAGAAGAAAAAGATATCCCAGAAGAAATTGAAGAAACAAAAGCTCATGGCACGGGAATAAATTCAGCATAAATAAATGCGGATAAAGTAAA