Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Matr3
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name matrin 3
Also known as P130/MAT3|snhg4
Coordinate chr18:28351691-28390764
Strand +
Gene summary Predicted to enable identical protein binding activity and miRNA binding activity. Predicted to be involved in activation of innate immune response and posttranscriptional regulation of gene expression. Predicted to act upstream of or within blastocyst formation; heart valve development; and ventricular septum development. Located in cytoplasm and nuclear matrix. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 21. Orthologous to human MATR3 (matrin 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Matr3

Retroname Coord Strand Genomic Region ENSG
Matr3P1 chr1:125877114-125880875 + Intragenic
N/A UCSC
Matr3P2 chr15:81442279-81447464 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_017600887.1
AGAGTCCGGGTGGGTGGCTGGGGGCTCTCTGCGTCTTTTCAGAGCCGGACGGCCGCCGTGGCTGAGGCTGTAGGGAGCTGGCACGCCGCTCCTGCTCTCTCCGGCTCGTCCGTTCTGCCTCCTTCGGCGCTGCGTATGTGAGCCGCCCGAGCGGCGGCCGCCATGTTAGGAGTGTAGTGGCGGCGCAGCCTGCCTCCTCGGGCGGCGGAGGTGAGCAGTTGTAGTGGAAGAGTTGTCTGCTGGTTCTCAGCTTGAAGAAGATTCTACAGTCCTTATTGATCCTTTTTCTTGGCGTTACCATTTTTGAAGCAAAGTTAACCTAGCTTTCTAGTTTGAGCTTTCTTTTTGGCCGTCTTTTAAAACATTTTTTTTTTGATCTATAAAATAGACAAGAGATAGTTCTACAATGTCCAAGTCATTCCAGCAGTCATCTCTCGGTAGGGATTCACAGGGTCATGGGCGTGACCTGTCTGCAGCAGGAATAGGCCTTCTTGCTGCTGCTACCCAGTCTTTAAGTATGCCAGCATCTCTTGGAAGGATGAACCAGGGTACTGCACGCCTTGCTAGCTTAATGAATCTTGGAATGAGTTCTTCATTGAATCAACAAGGAGCTCATAGTGCACTGTCTTCTGCTAGTACTTCTTCCCATAATTTGCAGTCTATATTTAACATTGGAAGTAGAGGTCCACTCCCTTTGTCTTCTCAACACCGTGGAGATACAGACCAGGCCAGTAATATTTTGGCCAGCTTTGGTCTGTCTGCTAGAGACTTAGATGAACTGAGTCGTTATCCAGAGGACAAGATTACTCCTGAGAACTTGCCCCAAATTCTTCTACAGCTTAAAAGGAGGAGAACTGAAGAAGGCCCTACATTGAGTTATGGTAGAGATGGCAGATCTGCTACACGGGAGCCACCATACAGAGTACCTAGGGATGATTGGGAAGAAAAAAGGCATTTTAGAAGAGATAGTTTTGATGATCGTGGTCCTAGTCTCAACCCAGTGCTTGATTATGACCATGGAAGTCGTTCTCAAGAATCTGGTTATTATGACAGAATGGATTATGAAGATGACAGATTAAGAGATGGAGAAAGGTGTAGGGATGATTCTTTTTTTGGTGAGACCTCGCATAACTATCATAAATTTGACAGTGAGTATGAGAGAATGGGACGTGGTCCTGGCCCCTTACAAGAGAGATCTCTCTTTGAGAAAAAGAGGGGCGCTCCTCCAAGTAGCAATATTGAAGACTTCCATGGACTCTTACCGAAGGGTTATCCCCATCTGTGCTCTATATGTGATTTGCCAGTTCATTCTAATAAGGAGTGGAGTCAACATATCAATGGAGCAAGTCACAGTCGTCGATGCCAGCTTCTTCTTGAAATCTACCCAGAATGGAATCCTGACAATGATACTGGACACACAATGGGTGATCCATTCATGCTGCAGCAGTCAACAAACCCAGCACCGGGAATTCTGGGACCGCCACCTCCTTCATTTCATCTTGGAGGACCAGCAGTTGGACCAAGAGGAAATCTGGGTGCTGGTAATGGGAACCTACAGGGACCAAGACACATGCAAAAAGGCAGAGTGGAAACCAGCCGAGTTGTTCACATTATGGATTTTCAGCGAGGAAAAAACTTGAGATACCAGCTATTACAACTGGTAGAACCATTTGGAGTCATTTCAAATCATCTGATTCTAAATAAAATTAATGAGGCATTTATTGAAATGGCGACCACAGAAGATGCTCAGGCTGCTGTGGATTATTATACAACTACACCAGCATTAGTGTTTGGCAAGCCAGTGAGAGTTCATTTATCCCAGAAGTATAAGAGAATAAAGAAACCTGAAGGAAAACCAGATCAGAAGTTTGATCAAAAGCAAGAACTTGGACGTGTGATACATCTCAGCAATTTACCTCATTCTGGCTATTCTGACAGTGCTGTCCTCAAGCTTGCAGAGCCTTATGGGAAAATAAAAAATTATATATTGATGAGGATGAAAAGTCAGgcttttattgagatggaaaccagagAAGATGCAATGGCAATGGTTGACCACTGTCTAAAGAAGGCACTTTGGTTTCAGGGAAGATGTGTTAAAGTTGACTTGTCTGAGAAATATAAAAAACTGGTGCTGAGGATTCCTAACAGAGGCATTGACTTACTGAAAAAAGATAAATCTCGGAAAAGATCCTATTCTCCAGATGGAAAAGAATCTCCAAGTGATAAGAAGTCCAAAACTGATGGTGCTCAGAAGACTGAGAATCCAGCTGAGGGTAAAGAACAAGAAGAGAAGTCGGGTGAGGATGGTGAGAAAGACACCAAGGATGACCAGACAGAACAGGAGCCCAGTATGCTTCTTGAATCTGAAGATGAATTGCTTGTCGATGAGGAAGAAGCTGCAGCACTACTAGAAAGTGGAAGCTCAGTGGGTGATGAGACTGATCTTGCTAATTTAGGGGATGTATCTTCTGATGGGAAAAAGGAGCCTTCAGATAAAGCTGTGAAAAAAGATGCAAGTGCAACATCCAAGAAAAAACTTAAAAAGGTGGACAAGATTGAGGAACTTGATCAAGAAAATGAAGCTGCATTGGAAAATGGGATTAAAAATGAGGAAAATACAGAACCAGGTGCTGAATCTGCTGAGAATGCTGATGATCCAAACAAAGACGCAAGTGATAATTCAGATGGCCAAAATGATGAGAACAAGGAGGACTATACAATTCCAGATGAGTATAGAATTGGACCATATCAGCCTAATGTTCCTGTTGGTATAGACTATGTGATACCTAAAACAGGGTTTTACTGTAAGCTGTGTTCACTCTTTTATACAAATGAAGAAGTTGCAAAGAATACTCATTGCAGCAGCCTTCCTCATTATCAGAAATTAAAGAAATTTCTGAATAAATTGGCAGAAGAACGGAGGCAGAAGAAGGAAACTTAAGATGTACAAGAAGCTTAATTATTTCAAAGAAAACAATGGTTCTTTGATTTTAATGTTAACCTTTTTTAAATACAATACTGATAGTTAGAAAACTACTGTACTCTTTTGTTTTAGTGGAAAATAATAGATGTCTGTTCATGTGTTTAAGTGTTATAGCAAAAAGTACACATACGGTTAAGTTAATGAAAAAGTTTTTGTTTCATCAGTGACAACAGACAAAAGTACTTCCTAGAGATTTGACTGTTGTAAGTAAGCTATGGAAAACAACTTGCACCACTAAGAGAAAGATAACATAGAACCATTCAGAAAACTGAAATTTAGTAGTTTAAGGCTTCAAAGAAATGTCAACTTTTGATTCCATTCAATAAAGTACAAAACCAATTGTATTTTTTATTACTTTTCATCTGAAACATTCCACATTTTAATCTGAGCCTTGCAGACTTTTCATTTGACTTTGGAAGCTGTTTCGGTTGCATTGCATTTTTAGAGAACTTCATTCATGTGAGATTGGAATTCAAATGCAGGTGCAGTTTTCTTTTAATGTCATGCTGTTTAGATGATAAGATATATTAAGTAATTGGCTTTAGATTTGTAATTTTTTTCCTCTGAGTTCCTGCTAGGTTTTGTATTCTAGTAGTCAATGTTATTTCAGTGAAATGTAAAAATATTACCGTTCTCTTTGACCAGTATTAATTTCTTGAGAACCTATTGCTTGTCACTTGAATCCTGTAGCTGTCAAACATCTCCGGTATAAGCAACATTTGATTTTTGAAGTGTGTAAACCATCTATATTTTCAAGATGTAATTTTACATTTCTGCATTTTAAAAGTTTGGCCATAATTCTAGAAGCACGCTTCTAATTCATGTACCTGCACATGTGACCTTTGTGAGCAGAAATTTGCATGTATAATCTGTGTTTACTTGTAACTCTCTGGTTATATACTGCTTATATCTGTGGATTCAAGTTACTGAAGTGAATACCAATAAAAAAAAAAACAACCTAGGCCATGTTGATTGGTTGGTTAAACATGTTTGGAATGTTAACCAAAA