Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Snrpd1
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small nuclear ribonucleoprotein D1 polypeptide
Also known as -
Coordinate chr18:1866066-1876613
Strand +
Gene summary Enables U1 snRNP binding activity. Predicted to be involved in spliceosomal snRNP assembly. Located in nucleus. Part of U1 snRNP. Used to study nephritis; proteinuria; and systemic lupus erythematosus. Human ortholog(s) of this gene implicated in connective tissue disease; nephritis; proteinuria; and systemic lupus erythematosus. Orthologous to human SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpd1

Retroname Coord Strand Genomic Region ENSG
Snrpd1P1 chr2:2470437-2471229 + Intragenic
 N/A UCSC
Snrpd1P2 chr4:66365781-66366324 - Intergenic
 N/A UCSC
Snrpd1P3 chr9:29361474-29362115 + Intergenic
 N/A UCSC
Snrpd1P4 chr9:41513342-41514109 - Intergenic
 N/A UCSC
Snrpd1P5 chr12:22217344-22217871 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001106163.1
CGTCGCGCATCCGCAGGTCTCCGCGCGCTCTTCCGGCCATTCATACTCCTAGTCTGTGGGTCTTTGGAGCCTGAATTCCGTGGACAGTTGGACTAGAAGGGAGACTGCGCCGCTAGGATGAAGCTCGTGAGATTTTTGATGAAATTGAGTCATGAAACCGTAACCATTGAATTGAAGAATGGAACGCAAGTCCATGGAACAATCACAGGTGTAGATGTCAGCATGAATACGCACCTTAAAGCTGTGAAAATGACCCTGAAGAACAGAGAGCCTGTACAGTTGGAAACATTGAGTATTCGAGGCAATAACATTCGGTATTTTATTCTACCAGACAGTTTACCTCTAGATACACTACTTGTGGATGTCGAACCTAAAGTGAAGTCTAAGAAAAGAGAGGCTGTTGCaggaagaggccgaggccggggtagaggaagaggacgtggtcgtggcagaggaagaggGGGTCCTAGGCGATAATGTCTCTCAAGATTGCTGTTTCAGATTGATAAGGAATTTGGGGTATTTTTTGTACAGGTTTTGTTTGTTTGTCAGTTTTTAATAAACATAAGGATAGGGACAGAGTTGTCTGCTGATTATCAAATTGAAGTTTTAGCGGCTACTGTATTCATAGAGTATGTTCCGCATGAAATACATATGTACTGAGCATCGGTTTGATTCCTTTGAGTCCATTATTTGGGCCCCTTTTGAGATGAAGTAAATTCTTGGTATTTTAATAAAGTTCTTACTGGGATGAGATCTAAAACTCATCCTCTTTAGTTTTACTCCATGGAGCCTTAGTGGTAAAAGAAAAAAATAAATGACTTTTcctggg
>XM_008771943.2
GGCTTCCGCGTTCTCGTCGCGCATCCGCAGGTCTCCGCGCGCTCTTCCGGCCATTCATACTCCTAGTCTGTGGGTCTTTGGAGCCTGAATTCCGTGGACAGTTGGACTAGAAGGGAGACTGCGCCGCTAGGATGAAGCTCGTGAGATTTTTGATGAAATTGAGTCATGAAACCGTAACCATTGAATTGAAGAATGGAACGCAAGTCCATGGAACAATCACAGACAGTTTACCTCTAGATACACTACTTGTGGATGTCGAACCTAAAGTGAAGTCTAAGAAAAGAGAGGCTGTTGCaggaagaggccgaggccggggtagaggaagaggacgtggtcgtggcagaggaagaggGGGTCCTAGGCGATAATGTCTCTCAAGATTGCTGTTTCAGATTGATAAGGAATTTGGGGTATTTTTTGTACAGGTTTTGTTTGTTTGTCAGTTTTTAATAAACATAAGGATAGGGACAGAGTTGTCTGCTGATTATCAAATTGAAGTTTTAGCGGCTACTGTATTCATAGAGTATGTTCCGCATGAAATACATATGTACTGAGCAT