Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Utp4
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name UTP4 small subunit processome component
Also known as Cirh1a|Cirhin|Naic|Teg-292|Tex292
Coordinate chr19:39087995-39116124
Strand +
Gene summary Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and regulation of transcription, DNA-templated. Predicted to be located in chromosome and fibrillar center. Predicted to be part of 90S preribosome; small-subunit processome; and t-UTP complex. Human ortholog(s) of this gene implicated in cholestasis and primary biliary cholangitis. Orthologous to human UTP4 (UTP4 small subunit processome component). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Utp4

Retroname Coord Strand Genomic Region ENSG
Utp4P1 chr15:19008662-19010906 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006255562.1
CGGAGCTATAGAGTGCGCACGCGCGCACGTGGGACCGGGGCGGAGAGAGGCGAGGTCCCGGGTAGCGAGTGCCTGGCGGAATGGGTGAATTTAAAGTCCATCGAGTTCGTTTCTTTAATTACGTTCCATCAGGCATCCGATGTGTGGCTTACAATAACCAGTCAAACAGATTGGCTGTTTCACGAACAGATGGCACGGTGGAAATTTATAATTTGTCTGCAAACTATTTTCAGGAGAAATTTTTCCCAGGTCATGAGTCTCGGGGTACCGAAGCCCTGTGTTGGGCAGAAGGACAGCGGCTCTTTAGTGCCGGACTGAATGGAGAAATTCTTGAGTATGACCTACAGGCACTAAACATCAAGTACACTTTGGATGCCTTTGGAGGACCGATTTGGAGTATGACCGCCAGCCCCAGTGGCTCTCAACTTTTGGTTGGCTGTGAAGATGGCTCCGTGAAATTATTTGAAGTCACCCCAGACAAAATCCAATTTGCAAGAAATTTCGATCGTCAAAAAAGTCGGATCCTGAGTCTCAGCTGGCATCCTGCTGGTACCCACGTTGCAGCTGGTTCCATAGACTACATTAGTGTGTTCGATGTCAAATCAGGGAGCATAACCCGGAAGATGGTTTTAGACAGGCAGCACCTGGGAGTGACCAAGTCAAGGTGCATAGTGTGGGGTGTTGCCTTCCTGTCCGACGGCACTGTCATAAGCGTGGACTCAGTTGGAAAGGTGCAGTTATGGGACTCAGCTACTGGGACACTTGTCAAGAGCCATCTCATCGCAAACGCTGACGTGCAGTCTATTGCTGTTGCTGATCAAGAAGACAGTTTTGTGGTGGGCACAGCCGAGGGCACAGTGTTCCATTTCCAGCTGGTGTCGGTGACTTCCAACAGCAGCGAGAAGCAGTGGGTGCGGACGAAACCATTCCAGCACCACACACACGACGTGCGCACTGTGGCCCACAGCCCAACAGCCCTGATATCAGGAGGCACCGACACCCACCTAGTTATTCGGCCTCTCATGGAGAAAGTGGAGGTAAAGAACTACGATGCCGCTCTCCGAAAGATCACTTTCCCCCATCGGCGTCTCATTTCCTGTTCAAAGCGAAGGCAGCTTCTCCTTTTCCAGTTTGCTCACCACTTGGAACTCTGGAGACTAGGATCCACAGCCGCAACAGGCAAGAATGGAGATACTCTTCCGCTCTCTAAAAATGCAGACCATCTCCTGCACCTCAAGACAAAGGGCCCTGAGAACATTATCTGCAGCTGCGTCTCCCCGTGTGGAAGTTGGATAGCCTATTCTACAGCGTCTCGGTTTTTTCTCTATCGATTGAAATATGAACGTGATAACATTAGCCTCCAAAGAGTTTCCAAATTACCAGCATTCCTTCGCTCTGCCCTTCATATTTTGTTTTCTGAAGATTCAACAAAGCTCTTTGTGGCATCAAATCAAGGGTCTCTACATGTCATCCATCTTTCGGAAGGAAGCTTCAAGCACTTGCATACTTTCCAGCCACAATCAGGGACAGTGGAGGCCATGTGTCTTTTGGCAGTCAGTCCCGATGGGAATTGGCTAGCTGCATCAGGTACCAGTGCTGGAGTCCACATATATGATCTGCATCATCTAAAGCTTCACTGCACAGTGCCTGCTTACAATTTCCCAGTGACTGCTCTGGCCATCGCCCCCAATACCAACAACCTGGTCATTGCTCATTCTGACCAGCAGGTATTTGAGTTCAGCATCCCAGACAAGCAGTATACAGAGTGGAGCCGCTCTGTCCAGAAGCAAGGATTTCACCAGCTGTGGCTCCAAAGGGATACTCCCATCACACACATCAGCATCCATCCCAAGAGACCCATGCACATCCTCCTCCATGACGCCTACATGTTCTGCATCATTGACAAGTCCTTGCCACTTCCAAATGACAAAACTGTGCTCTATAATCCGCTTCCTCCGAAAAACGAATCAGATGTCTTCCTGAGGCGCACGACCCATGGATTTAAAATGTCTAAGATATATAAGCCCTTACTCTTTATGGATCTTTTGGATGAAAGGACACTTGTGGCAGTAGAACGACCTCTGGATGACATCATTGCTCAGCTCCCACCACCCATCAAAAAGAAGAAATTTGGAACTTAAAACGGGACACTGACTGTGTCctttcttgaactgtctgtcctgttctttgtttgttcgtttctttgtttgttttttctGAAATCATGATAATAAAACAAAGTTATTCTTTA