Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Kars1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name lysyl-tRNA synthetase 1
Also known as Kars|LysRS
Coordinate chr19:44212205-44231209
Strand -
Gene summary Enables several functions, including ATP binding activity; lysine-tRNA ligase activity; and tRNA binding activity. Involved in several processes, including ERK1 and ERK2 cascade; diadenosine tetraphosphate biosynthetic process; and lysyl-tRNA aminoacylation. Located in cytosol and nucleus. Part of aminoacyl-tRNA synthetase multienzyme complex. Biomarker of sciatic neuropathy. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease recessive intermediate B and autosomal recessive nonsyndromic deafness 89. Orthologous to human KARS1 (lysyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Kars1

Retroname Coord Strand Genomic Region ENSG
KarsP1 chr20:32463092-32463329 + Intragenic
 N/A UCSC
KarsP2 chr20:33957807-33958044 + Intragenic
Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001006967.1
GGCCACGCTGCGGGAGGGTGAAGTCAAATTGGATGGCGAGCCGAAACTAAGCAAGAAGTGGTGGTAATCATTAGTTCCAGGGTGTTCTGCCATGTTGATGCAAGCTGCTGTCAGGCTTGTTAGGGGGTCCCTGCGCCAAACCTCATGGGCAGAATGGGGTCAGAGGGAACTTCGACTGGGCCAACTTGCTCCTTTCACAACGCTCCGCAAGGACAAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGCGTCTGAAAGCTGAGAAGAAGCTGGCAGAGAAAGAGGCCAAGCAGAAAGAGCTCAGTGAAAAGCAGCTAAACCAGACGACTGCTGCTGCTGCCACCAACCATACTGCTGACAATGGTGTGGGTGCTGAAGAGGAGACCCTGGACCCAAACCAATACTACAAGATCCGTAGTCAAGCTGTCCAGCAGCTGAAGGTCAGTGGGGAGGACCCGTACCCACACAAGTTCCATGTGGACATCTCACTCACTCAGTTCATCCAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATCACCTTAAAAGTAGCAGGTCGCATCCACGCCAAGAGAGCCTCTGGGGGAAAGCTCATCTTCTATGACCTTCGAGGAGAGGGGGTCAAGTTACAAGTCATGGCCAACTCCAGGAATTATAAATCAGAGGAAGAATTCGTTCACATCAATAACAAACTGCGCAGGGGAGACATAATCGGAGTCGAGGGCAATCCCGGAAAAACCAAGAAGGGTGAGCTGAGCATCGTCCCCCGGGAGATGACACTCCTGTCCCCCTGCTTGCACATGCTGCCTCATCTTCACTTCGGCCTCAAGGACAAGGAAACAAGGTATCGTCAGAGATACTTGGACTTGATACTGAACGACTTTGTGAGGCAGAAGTTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTCTTGGACGAGCTGGGATTCCTAGAGATCGAGACTCCCATGATGAACATCATCCCCGGGGGAGCTGTGGCCAAGCCTTTCATCACCTACCACAACGAGCTGGACATGAACCTGTACATGAGAATTGCTCCAGAGCTCTACCACAAGATGCTGGTGGTTGGTGGCATTGACCGGGTTTATGAAATTGGGCGCCAGTTCCGGAACGAAGGGATTGATTTGACTCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACTATCATGACCTCATGGAAATCACAGAGAAGATGCTGTCAGGGATGGTGAGAAGCATCACAGGCAGTTACAAGATCACCTATCACCCAGATGGGCCAGAAGGCCAAGCCTATGAGATTGACTTCACCCCACCCTTCCGAAGAATCAGCATGGTAGAAGAGCTTGAGAAGGTTCTGGGCGTGAAGCTGCCAGAAACCAGTCTCTTTGAGACCGAAGAAACTCGCAAAATTCTCGATGATATTTGTGTTGCAAGGGCTGTTGAATGCCCCCCACCTCGGACCACAGCCAGGCTCCTTGATAAGCTTGTGGGAGAGTTCCTCGAAGTGACATGCATCAGCCCTACATTCATCTGTGATCACCCACAGATCATGAGTCCTCTGGCCAAATGGCACCGTTGCAAAGAGGGTCTAACTGAGCGCTTCGAGCTGTTTGTCATGAAGAAGGAAATATGCAATGCGTACACTGAGCTGAACGACCCCGTGCGGCAGAGACAACTGTTTGAAGAACAGGCCAAGGCCAAGGCTGCTGGTGACGATGAGGCCATGTTCATAGATGAGAACTTCTGTACTGCCCTGGAGTACGGGCTGCCCCCAACAGCTGGCTGGGGCATGGGTATCGACCGAGTCACCATGTTTCTCACAGACTCCAACAATATCAAGGAAGTACTTCTCTTTCCTGCCATGAAGCCTGAAGACAAGAAGGAAACTGCAACAGCCACCGAGACCCCAGAAAGCACAGAGGCCAGCCCCTCTGTCTAGAAGACTATGCAACTATGGCCTTTGCGCTTGAGCAGCAGATCTGGTCTGAGGGAGGGAGGGGTTCCTGTGTGGTGCCCGCCCACTGGACACTGCAGTCCAACCACCACAAGAGAGAAGAATTAAAGAATTTCTTTTTATTCCTTGTTACCAAATAAACCATTTCTCTCTTTA