Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Prpf31
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name pre-mRNA processing factor 31
Also known as -
Coordinate chr1:64150786-64162461
Strand -
Gene summary Predicted to enable identical protein binding activity; snRNA binding activity; and snRNP binding activity. Predicted to be involved in mRNA splicing, via spliceosome and ribonucleoprotein complex localization. Predicted to act upstream of or within spliceosomal tri-snRNP complex assembly. Predicted to be located in Cajal body and nuclear speck. Predicted to be part of nucleus. Human ortholog(s) of this gene implicated in retinitis pigmentosa 11. Orthologous to human PRPF31 (pre-mRNA processing factor 31). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Prpf31

Retroname Coord Strand Genomic Region ENSG
Prpf31P1 chr16:17885573-17887331 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001106219.1
GTAAAGCGTCATCAAAGAGCGCCGAAGCTCTGGGGAAGCGGATTTCTTAGAAACGATCGTGAGAGGATTGAAGCGGTCTTGGGATGTCGCTGGCAGATGAGCTCTTGGCTGACCTTgaggaggcagcagaagaagaagaaggaggaagctatggagaagaagaggaggaGCCAGCAATTGAGGATGTACAAGAGGAGACACAACTGGATCTTTCTGGAGATTCAGTCAAGAGCATTGCCAAGCTATGGGATAGCAAGATGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGTGATGGGACCGGTGGAGGCAGCCCCTGAGTACCGAGTCATTGTGGATGCCAACAACCTGACTGTGGAGATAGAAAACGAGCTGAACATTATCCATAAGTTCATCCGGGATAAATACTCAAAGAGATTCCCTGAGCTAGAATCCTTGGTGCCCAACGCTCTGGATTACATCCGCACAGTCAAGGAACTGGGCAACAGCCTGGATAAGTGTAAGAACAATGAGAATCTCCAGCAGATCCTGACCAATGCTACCATCATGGTTGTTAGTGTTACTGCCTCTACCACCCAGGGGCAGCAGCTGTCAGATGAGGAACTAGAGCGACTAGAGGAGGCCTGTGACATGGCACTGGAGCTGAATGCCTCCAAGCACCGCATCTATGAGTACGTGGAGTCCCGGATGTCGTTCATTGCACCCAACTTGTCCATCATCATTGGAGCTTCCACGGCTGCCAAGATCATGGGTGTGGCTGGAGGGCTGACCAACCTGTCTAAGATGCCTGCCTGCAACATCATGCTGTTGGGAGCCCAGCGCAAGACACTGTCTGGCTTCTCTTCTACCTCAGTGCTGCCTCACACTGGCTACATCTACCACAGTGACATTGTGCAGTCTCTGCCCCCAGATCTTCGGCGGAAGGCAGCCCGCCTAGTGGCTGCCAAATGTACACTGGCAGCTCGTGTGGACAGTTTCCATGAGAGCACAGAGGGGAAGGTGGGCTATGAACTAAAGGACGAGATTGAGCGCAAGTTTGACAAGTGGCAGGAGCCACCACCTGTGAAGCAGGTGAAGCCCCTGCCTGCACCCCTTGATGGGCAGCGGAAGAAGCGAGGGGGCCGAAGGTACCGCAAGATGAAAGAACGGCTAGGACTGACTGAGATCCGGAAGCAGGCCAACCGCATGAGCTTTGGAGAGATTGAGGAGGATGCCTATCAAGAAGACCTGGGCTTTAGCCTGGGCCACTTGGGCAAGTCAGGCAGTGGGCGTGTGCGGCAGACACAGGTGAATGAGGCCACCAAGGCTAGGATCTCCAAGACACTACAGCGGACCTTACAGAAACAGAGTGTGGTGTATGGTGGGAAGTCAACAATTCGTGACCGCTCCTCGGGGACTGCCTCTAGTGTGGCCTTCACTCCACTCCAGGGTCTGGAGATTGTGAACCCACAAGCAGCCGAGAAGAAGGTGGCAGAGGCCAATCAGAAGTATTTCTCTAGCATGGCCGAGTTCCTCAAGGTCAAGGGTGAGAAAAGTGGCACCATGTCTACTTGAAGGGGCCCACAGCCCAGGTGGCCATCCACTGAAAGGACATAAAGGACTGGAGCTTCTGAAGTGACAGATATCCAGCCAGGAAGTTTGGTGTGGTGGAGGCAGCCTTCCATGCTCTGTCCTTGGCCCAAGGCCACAGCATCCAAGAAAAGGATGAAGAACCTTAGCCTGTCTCCCCCAGCACTCATGCTGCTGCTGTTCCAATCGGGCAGGAAGGTCTTCCACACACTCAGCTTTTTTACTTACAGGGGAAAAAGGAAGTGCttttttttttttttttttttttttttttttAGACTGAATACAATTAAATGCATAGTGTCTAGCTCTGAACAGAGGGTATGATTTGTTTATGAAAGAACCAGAGGACTCAGAGCTGTGGGGCTTCCAGAGTGAGTAGCATGGACCCAGCTCTCTTTTGCTCTTGTCCTGGAATCTAAGAAAAACCCTGTCTATCTCTTAACACCACACTTAATGAGAACATCAGCATCATGGCCAAACAGTATGGCCACCACAAAATTCCGGACCCAACAAGAGCCAGAGGATTATTGTCCCTCAGGCTAGAAACTTCACCCACACAAAGTGAAGCACCTAAAAGGTTTGGGAAGTATGTTCAGAAAGCACCACCCAGTACTGCATTCATGGTGCAGCCTATTTTTAATTCATGTTCGTTAGGGGGCCACACCTAGGTCCTCAGCAAGGGTGAGGCAAGTGGGTACCCTGCCCTATGAGGTACCAATGCCAGGTAAGCAAAAGAAGTGCAGTGCACACTACCCAGTTTGATTTGCAAACTGGGGCTTCATCAAGGGAAAAGAAGAACAGTG