Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl9
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L9
Also known as -
Coordinate chr14:44524419-44527613
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Involved in cellular response to nerve growth factor stimulus. Part of cytosolic large ribosomal subunit. Orthologous to human RPL9 (ribosomal protein L9). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl9

Retroname Coord Strand Genomic Region ENSG
Rpl9P1 chr1:197896078-197896718 - Intergenic
N/A UCSC
Rpl9P2 chr1:213562691-213563379 - Intergenic
N/A UCSC
Rpl9P3 chr1:241913478-241914104 - Intergenic
N/A UCSC
Rpl9P4 chr1:42600319-42600987 - Intergenic
N/A UCSC
Rpl9P5 chr1:77651637-77651930 - Intragenic
N/A UCSC
Rpl9P6 chr1:8033329-8033894 - Intragenic
N/A UCSC
Rpl9P7 chr2:106702711-106703401 - Intergenic
N/A UCSC
Rpl9P8 chr2:198030326-198031032 + Intergenic
N/A UCSC
Rpl9P9 chr2:211392058-211392208 - Intragenic
N/A UCSC
Rpl9P10 chr2:218566179-218566863 - Intergenic
N/A UCSC
Rpl9P11 chr2:257702294-257702973 + Intragenic
N/A UCSC
Rpl9P12 chr2:57499761-57500440 - Intergenic
N/A UCSC
Rpl9P13 chr2:78384423-78385108 - Intergenic
N/A UCSC
Rpl9P14 chr3:120017082-120017764 - Intergenic
N/A UCSC
Rpl9P15 chr3:139743176-139743705 + Intragenic
N/A UCSC
Rpl9P16 chr3:4010036-4010585 + Intergenic
N/A UCSC
Rpl9P17 chr3:47810532-47811215 - Intergenic
N/A UCSC
Rpl9P18 chr3:53212518-53213073 - Intergenic
N/A UCSC
Rpl9P19 chr3:59604484-59605068 - Intergenic
N/A UCSC
Rpl9P20 chr3:75722942-75723551 + Intergenic
N/A UCSC
Rpl9P21 chr4:113808053-113808696 + Intragenic
N/A UCSC
Rpl9P22 chr4:148180730-148181868 - Intragenic
N/A UCSC
Rpl9P23 chr4:159663415-159664049 - Intergenic
N/A UCSC
Rpl9P24 chr4:21229463-21229868 - Intergenic
N/A UCSC
Rpl9P25 chr4:40091478-40092143 - Intragenic
N/A UCSC
Rpl9P26 chr5:120193117-120193687 - Intergenic
N/A UCSC
Rpl9P27 chr5:128050722-128051408 - Intergenic
N/A UCSC
Rpl9P28 chr5:157771156-157771690 + Intergenic
N/A UCSC
Rpl9P29 chr5:163612517-163613207 + Intragenic
N/A UCSC
Rpl9P30 chr5:35794903-35795582 - Intergenic
N/A UCSC
Rpl9P31 chr5:38922473-38923119 - Intragenic
N/A UCSC
Rpl9P32 chr5:59588668-59589033 + Intergenic
N/A UCSC
Rpl9P33 chr5:63144991-63145160 - Intergenic
N/A UCSC
Rpl9P34 chr5:64608512-64608681 - Intergenic
N/A UCSC
Rpl9P35 chr5:66476918-66477471 + Intergenic
N/A UCSC
Rpl9P36 chr5:91166142-91166825 + Intergenic
N/A UCSC
Rpl9P37 chr6:107328735-107328948 + Intergenic
N/A UCSC
Rpl9P38 chr6:62788733-62789415 + Intergenic
N/A UCSC
Rpl9P39 chr6:76339260-76339875 + Intergenic
N/A UCSC
Rpl9P40 chr6:80075734-80076354 - Intragenic
N/A UCSC
Rpl9P41 chr6:94835053-94835737 + Intergenic
N/A UCSC
Rpl9P42 chr7:130610330-130610973 - Intergenic
N/A UCSC
Rpl9P43 chr7:29948937-29949627 - Intragenic
N/A UCSC
Rpl9P44 chr8:35425910-35426213 + Intergenic
N/A UCSC
Rpl9P45 chr8:82253666-82254349 - Intragenic
N/A UCSC
Rpl9P46 chr8:98125940-98126404 - Intergenic
N/A UCSC
Rpl9P47 chr9:31812400-31812948 - Intragenic
N/A UCSC
Rpl9P48 chr10:11078837-11079215 + Intragenic
N/A UCSC
Rpl9P49 chr10:11862141-11862721 - Intragenic
N/A UCSC
Rpl9P50 chr10:14360870-14361197 + Intragenic
N/A UCSC
Rpl9P51 chr10:17959235-17959407 + Intergenic
N/A UCSC
Rpl9P52 chr10:5685495-5686229 - Intergenic
N/A UCSC
Rpl9P53 chr10:57523737-57524030 + Intragenic
N/A UCSC
Rpl9P54 chr10:62967368-62967988 - Intergenic
N/A UCSC
Rpl9P55 chr11:13371555-13371731 - Intergenic
N/A UCSC
Rpl9P56 chr11:17039097-17039711 + Intergenic
N/A UCSC
Rpl9P57 chr11:54628326-54629012 - Intragenic
N/A UCSC
Rpl9P58 chr11:62980984-62981677 - Intergenic
N/A UCSC
Rpl9P59 chr11:86542958-86543635 - Intergenic
N/A UCSC
Rpl9P60 chr13:101572752-101573428 + Intragenic
N/A UCSC
Rpl9P61 chr13:53933270-53933957 - Intergenic
N/A UCSC
Rpl9P62 chr13:57340126-57340564 - Intragenic
N/A UCSC
Rpl9P63 chr13:60389298-60389981 - Intergenic
N/A UCSC
Rpl9P64 chr14:25584538-25585222 - Intergenic
N/A UCSC
Rpl9P65 chr14:54886493-54886915 - Intragenic
N/A UCSC
Rpl9P66 chr14:84305051-84305723 + Intergenic
N/A UCSC
Rpl9P67 chr14:91242961-91243648 + Intragenic
N/A UCSC
Rpl9P68 chr15:28603334-28603996 + Intragenic
N/A UCSC
Rpl9P69 chr15:42013960-42014609 + Intergenic
N/A UCSC
Rpl9P70 chr15:57130036-57130653 + Intergenic
N/A UCSC
Rpl9P71 chr15:83581088-83581607 + Intragenic
N/A UCSC
Rpl9P72 chr15:89577452-89578133 + Intergenic
N/A UCSC
Rpl9P73 chr16:61130755-61131440 + Intergenic
N/A UCSC
Rpl9P74 chr16:6440440-6440863 - Intergenic
N/A UCSC
Rpl9P75 chr17:21737218-21737804 - Intragenic
Intragenic
Intragenic
N/A UCSC
Rpl9P76 chr17:22689232-22689817 + Intergenic
N/A UCSC
Rpl9P77 chr17:27862186-27862874 - Intergenic
N/A UCSC
Rpl9P78 chr17:40266957-40267633 - Intergenic
N/A UCSC
Rpl9P79 chr17:47544444-47545134 + Intergenic
N/A UCSC
Rpl9P80 chr17:62402781-62403443 + Intragenic
N/A UCSC
Rpl9P81 chr18:2144167-2144840 - Intergenic
N/A UCSC
Rpl9P82 chr18:40073057-40073747 - Intergenic
N/A UCSC
Rpl9P83 chr18:79580203-79580883 + Intergenic
N/A UCSC
Rpl9P84 chr19:14245366-14245997 - Intergenic
N/A UCSC
Rpl9P85 chr20:14701031-14701711 + Intergenic
N/A UCSC
Rpl9P86 chrX:1543243-1543936 + Intergenic
N/A UCSC
Rpl9P87 chrX:7733480-7733751 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001007598.3
CTCTTTGCCCCATCTACTGCGAGAATGAAGACCATTCTCAGCAATCAGACTGTCGACATTCCAGAAAATGTCGACATCACTCTGAAGGGGCGCACAGTCATTGTGAAGGGCCCCAGAGGAACTCTGAGGAGGGACTTCAATCACATCAATGTAGAGCTGAGTCTTCTTGGAAAGAAAAAGAAAAGGCTCCGTGTTGACAAGTGGTGGGGTAACAGGAAGGAACTGGCCACTGTCAGAACCATCTGCAGTCATGTTCAGAACATGATCAAGGGTGTGACACTGGGCTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCTATCAACGTCGTTATTCAGGAGAATGGGTCTCTGGTTGAAATCCGAAATTTCTTGGGTGAAAAATACATCCGGAGGGTTCGGATGAGGACAGGTGTTGCTTGTTCTGTCTCTCAAGCCCAGAAGGATGAGTTAATCCTTGAAGGAAATGATATTGAACTTGTTTCAAATTCAGCGGCTCTGATTCAGCAAGCCACAACAGTTAAAAACAAGGATATCAGGAAGTTTTTGGATGGCATCTATGTTTCTGAGAAGGGAACCGTCCAGCAGCCTGACGAATGAGACCTCAGTTTCCTAGCTTCAGAAACAAGATCCTGATAACAAGTACAGTTTGGGCTCTGTGGAAACAATAAAAGACTTATATATTGA