Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps7
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S7
Also known as -
Coordinate chr6:47899525-47904389
Strand -
Gene summary Enables poly(U) RNA binding activity. Predicted to be involved in several processes, including negative regulation of cellular protein metabolic process; protein stabilization; and ribosome biogenesis. Predicted to act upstream of or within cell differentiation and neural tube closure. Part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 8. Orthologous to human RPS7 (ribosomal protein S7). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps7

Retroname Coord Strand Genomic Region ENSG
Rps7P1 chr2:260892344-260892883 - Intragenic
N/A UCSC
Rps7P2 chr3:13514277-13514853 - Intragenic
N/A UCSC
Rps7P3 chr3:14172093-14172346 - Intergenic
N/A UCSC
Rps7P4 chr3:53359196-53359752 + Intergenic
N/A UCSC
Rps7P5 chr3:61425962-61426593 + Intergenic
N/A UCSC
Rps7P6 chr3:71837214-71837865 - Intragenic
N/A UCSC
Rps7P7 chr4:139538027-139538531 - Intergenic
N/A UCSC
Rps7P8 chr4:159540225-159540878 - Intergenic
N/A UCSC
Rps7P9 chr4:88675489-88676080 - Intergenic
N/A UCSC
Rps7P10 chr5:109440673-109441306 + Intergenic
N/A UCSC
Rps7P11 chr5:169021527-169022178 - Intergenic
N/A UCSC
Rps7P12 chr6:100075486-100075751 + Intergenic
N/A UCSC
Rps7P13 chr6:50454540-50454877 - Intergenic
N/A UCSC
Rps7P14 chr8:6080511-6081134 + Intergenic
N/A UCSC
Rps7P15 chr8:79443192-79443700 - Intergenic
N/A UCSC
Rps7P16 chr11:31673099-31673582 + Intergenic
N/A UCSC
Rps7P17 chr11:84123903-84124548 - Intergenic
N/A UCSC
Rps7P18 chr13:51332339-51332993 - Intergenic
N/A UCSC
Rps7P19 chr15:106314139-106314792 - Intergenic
N/A UCSC
Rps7P20 chr15:10631441-10632092 + Intergenic
N/A UCSC
Rps7P21 chr16:5973840-5974349 + Intergenic
N/A UCSC
Rps7P22 chr16:68081978-68082622 + Intergenic
N/A UCSC
Rps7P23 chr17:29959011-29959615 + Intergenic
N/A UCSC
Rps7P24 chr18:59545407-59545719 - Intergenic
N/A UCSC
Rps7P25 chr19:19296621-19297083 + Intragenic
N/A UCSC
Rps7P26 chr20:30474620-30475261 + Intergenic
N/A UCSC
Rps7P27 chrX:73807883-73808523 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031570.2
CTCTTTCTAAGCCGGCACTCCGTAAGGACGAAGCCATGTTCAGCTCGAGCGCCAAGATTGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCTGGCATCTCTCAGGCGCTGCTCGAGCTGGAGATGAACTCGGATCTGAAGGCGCAGCTGCGGGAACTCAACATCACCGCGGCAAAGGAAATCGAAGTCGGTGGTGGTCGAAAAGCCATCATAATTTTTGTACCAGTTCCTCAGCTGAAATCTTTCCAGAAAATCCAAGTCCGGCTAGTTCGTGAATTGGAGAAAAAGTTCAGTGGGAAACACGTAGTCTTCATTGCTCAGAGGAGGATTCTGCCCAAGCCAACCCGAAAAAGCCGTACGAAAAATAAGCAAAAGCGCCCCAGAAGCCGCACCCTGACAGCAGTGCACGACGCCATCCTTGAGGATTTGGTCTTCCCAAGTGAAATTGTGGGCAAGAGGATCCGTGTGAAACTGGATGGCAGCCGGCTCATAAAAGTTCATTTAGACAAAGCACAGCAGAACAACGTGGAGCACAAGGTCGAAACTTTTTCTGGCGTGTACAAGAAGCTCACAGGCAAGGATGTTAACTTTGAATTCCCAGAGTTTCAGTTGTAAAGAAAATGACTGAATAAAATGTCATTCATAATA