Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Vta1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name vesicle trafficking 1
Also known as Lip5|RGD1305031
Coordinate chr1:8830405-8878191
Strand -
Gene summary Predicted to enable protein C-terminus binding activity. Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway and viral budding. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in multivesicular body. Orthologous to human VTA1 (vesicle trafficking 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vta1

Retroname Coord Strand Genomic Region ENSG
Vta1P1 chr11:41720687-41721998 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_006227646.2
AGTGTCTGTGACCCGCTAGTAGGAAGTGGCGCTTCCGGGAGTGGAGATGGCTGCGCTGGCCCCGCTGCCGCCGCTGCCCGCGCAGTTTAAGAGCATACAGCACCATTTGAGAACGGCGCAGGAGCATGACAAGCGAGATCCTGTGGTGGCCTACTACTGTCGTTTATATGCTATGCAAACTGGAATGAAGATTGATAGTAAAACTCCTGAATGTCGTAAATTTTTATCAAAGCTAATGGATCAGTTAGAAGCTCTTAAGAAACAGTTGGGGGATAATGAAGCTGTTACTCAAGAAATCGTTGGTTGTGCCCATTTGGAAAATTATGCTTTGAAAATGTTCCTGTACGCGGACAACGAAGACCGAGCTGGACGATTTCACAAAAACATGATCAAGTCCTTCTACACTGCCAGCCTTTTAATAGATGTCATCACAGTGTTTGGCGAGCTCACAGATGAAAATGTGAAACATAGAAAGTACGCAAGGTGGAAGGCAACATATATTCATAACTGCTTAAAGAATGGGGAGACTCCTCAAGCAGGCCCTGTTGGAATAGAGGAAGATAACGATGTTGAGGAAAATGAAGATGTTGGTGCAACCTCTCTGCCCACTCAGCCACCTCAGCCATCATCATCCTCAACGTACGACCCAAGCAACTTGGCAGCAGGCAGCTACAGTGGGATACAGATCCCTCCGGGTGCACATGCTCCAGCCAATACCCCTGCAGAAGTGCCGCACAGCACAGGTGTAACAAGTAATGCTGTCCAGCCTAGTCCACAGACTGTCCCAGCCATTCCCGCCATTGATCCTGACCTGTACACAGCTTCCCAGGGGGATGTCCGCCTGACCCCAGAGGACTTTGCTCGGGCTCAGAAGTACTGCAAGTACGCTGGCAGTGCCCTGCAGTATGAAGACGTGAGCACCGCGGTGCAGAACCTGCAGAAGGCCCTCAGGCTGCTGACAACGGGCAGGGAATGAAGCTCTGCTCACGGACCCCATGCGTTTTCTGCATAGAGAACTAACATTCAGTACACTTTCCTCAGCCTTTCAGGAGCATGGTTTTACAGAAGACCTCAGTTCCCCGAGTAAGACAGTGGCTCCTGTTGTCGTCAGCTGCCTCAGCCAGTTGTCATTGAGCGTGTAGAGCTGATGTTAGCATCAAACCCCGCTATGGAATGTCCCTGTAGAAAATCCTGGTGGGTATAGTATGCTTTCTTAATGTATACACACTAAAGGACGTTTTTGAAAAGTCGGTAATATTTGGACAAACCATATTATGTTGCTTTAATATTCTAAATTAAACTTTTAATAAAGATTACCAGAATGTTCTAGGTT