Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl23
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L23
Also known as RL23a
Coordinate chr10:85721398-85725359
Strand -
Gene summary Predicted to enable several functions, including transcription coactivator binding activity; ubiquitin ligase inhibitor activity; and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in several processes, including cellular response to actinomycin D; negative regulation of nitrogen compound metabolic process; and protein stabilization. Located in ribosome. Part of cytosolic large ribosomal subunit. Is active in postsynaptic density. Orthologous to human RPL23 (ribosomal protein L23). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl23

Retroname Coord Strand Genomic Region ENSG
Rpl23P1 chr1:165060509-165060968 + Intergenic
N/A UCSC
Rpl23P2 chr1:9348237-9348398 + Intergenic
N/A UCSC
Rpl23P3 chr2:46522805-46523199 - Intergenic
N/A UCSC
Rpl23P4 chr2:47606131-47606525 - Intergenic
N/A UCSC
Rpl23P5 chr2:57650514-57650976 - Intragenic
N/A UCSC
Rpl23P6 chr3:2405252-2405723 + Intergenic
N/A UCSC
Rpl23P7 chr4:113944410-113945039 - Intergenic
N/A UCSC
Rpl23P8 chr4:114810138-114810767 - Intergenic
N/A UCSC
Rpl23P9 chr4:66261413-66261891 + Intergenic
N/A UCSC
Rpl23P10 chr4:97296321-97296498 - Intergenic
N/A UCSC
Rpl23P11 chr6:8122270-8122861 - Intergenic
N/A UCSC
Rpl23P12 chr7:142486590-142487042 + Intergenic
N/A UCSC
Rpl23P13 chr7:28314999-28315345 + Intergenic
N/A UCSC
Rpl23P14 chr9:55077706-55078180 + Intergenic
N/A UCSC
Rpl23P15 chr11:79060289-79060496 + Intergenic
N/A UCSC
Rpl23P16 chr13:74348473-74348734 + Intergenic
N/A UCSC
Rpl23P17 chr13:96577992-96578449 + Intergenic
N/A UCSC
Rpl23P18 chr16:52066201-52066685 + Intergenic
N/A UCSC
Rpl23P19 chrX:129281904-129282332 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001007599.2
GACTCTTTCCGGACGCTCAAGATGTCGAAGCGAGGACGTGGTGGGTCCTCCGGAGCGAAATTCCGGATTTCCCTGGGTCTTCCGGTAGGAGCTGTGATCAACTGTGCTGACAACACAGGAGCCAAAAACCTGTATATCATCTCTGTGAAGGGAATCAAGGGACGGCTGAACAGACTTCCTGCTGCTGGTGTGGGCGACATGGTGATGGCCACAGTTAAGAAAGGCAAACCAGAACTAAGGAAAAAGGTACATCCTGCAGTGGTGATTCGACAACGAAAGTCATATCGAAGAAAAGACGGGGTGTTCCTTTATTTTGAAGATAATGCAGGGGTCATAGTAAACAATAAAGGCGAGATGAAAGGTTCTGCTATCACAGGTCCAGTTGCAAAGGAGTGTGCAGACTTGTGGCCCAGGATTGCATCCAATGCAGGAAGCATTGCCTGATTCTCCAGTGTGTTTGTAAAATATATTCATTAAAGTCTTCTCTC