Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps17
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S17
Also known as -
Coordinate chr1:143167329-143169915
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in erythrocyte homeostasis; rRNA processing; and ribosomal small subunit biogenesis. Part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 4. Orthologous to human RPS17 (ribosomal protein S17). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps17

Retroname Coord Strand Genomic Region ENSG
Rps17P1 chr1:245013139-245013547 + Intergenic
N/A UCSC
Rps17P2 chr2:245854236-245854479 + Intergenic
N/A UCSC
Rps17P3 chr3:24600598-24601063 - Intergenic
N/A UCSC
Rps17P4 chr4:121569545-121569795 - Intergenic
N/A UCSC
Rps17P5 chr4:132808202-132808397 - Intergenic
N/A UCSC
Rps17P6 chr4:168887888-168888351 - Intergenic
N/A UCSC
Rps17P7 chr4:43948820-43949045 - Intergenic
N/A UCSC
Rps17P8 chr4:5996824-5997248 - Intergenic
N/A UCSC
Rps17P9 chr5:101499334-101499755 - Intergenic
N/A UCSC
Rps17P10 chr6:1627716-1628141 - Intergenic
N/A UCSC
Rps17P11 chr6:99575743-99576197 - Intergenic
N/A UCSC
Rps17P12 chr7:72694264-72694732 + Intergenic
N/A UCSC
Rps17P13 chr8:105087960-105088425 - Intergenic
N/A UCSC
Rps17P14 chr8:83802668-83802816 + Intergenic
N/A UCSC
Rps17P15 chr9:106913889-106914354 - Intergenic
N/A UCSC
Rps17P16 chr9:3174321-3174775 - Intragenic
N/A UCSC
Rps17P17 chr11:38426872-38427325 - Intergenic
N/A UCSC
Rps17P18 chr12:45569776-45570243 - Intergenic
N/A UCSC
Rps17P19 chr13:73150768-73151384 + Intergenic
N/A UCSC
Rps17P20 chr14:11346890-11347339 - Intergenic
N/A UCSC
Rps17P21 chr14:24842946-24843301 + Intergenic
N/A UCSC
Rps17P22 chr14:81043427-81043882 + Intragenic
N/A UCSC
Rps17P23 chr15:34057175-34057647 + Intergenic
N/A UCSC
Rps17P24 chr15:49008931-49009398 + Intergenic
N/A UCSC
Rps17P25 chr15:50910878-50911331 + Intergenic
N/A UCSC
Rps17P26 chr15:64190717-64191138 - Intergenic
N/A UCSC
Rps17P27 chr16:61851948-61852405 - Intergenic
N/A UCSC
Rps17P28 chrX:114532582-114533383 + Intergenic
N/A UCSC
Rps17P29 chrX:134156875-134157051 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_017152.3
TTCCTCTTTTACCGAGACCCGTCAACATGGGCCGCGTTCGCACCAAGACTGTGAAGAAGGCGGCCCGGGTCATCATCGAGAAGTACTACACGCGCCTGGGTAATGACTTTCACACCAACAAGCGCGTGTGCGAGGAGATCGCCATCATCCCCAGCAAAAACCTTCGGAACAAGATAGCCGGCTATGTCACGCATCTGATGAAGCGGATTCAGAGAGGTCCTGTGAGAGGCATCTCCATCAAGTTGCAGGAAGAAGAGAGGGAGAGGAGAGATAATTATGTTCCTGAGGTCTCAGCCCTAGATCAGGAGATCATTGAGGTAGATCCTGACACCAAGGAAATGCTGAAGCTTCTGGACTTTGGCAGTCTCTCCAACCTCCAGGTCACTCAGCCTACGGTTGGGATGAATTTCAAAACACCACGTGGAGCTGTTTAATCCATTATGCCATATTTTCAATAAACCTGAAAA