Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps3a
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S3a
Also known as -
Coordinate chr2:185440477-185444846
Strand -
Gene summary Enables mRNA binding activity and translation initiation factor binding activity. Involved in positive regulation of fibroblast proliferation; positive regulation of translation; and response to ethanol. Located in nucleus. Part of cytosolic small ribosomal subunit. Orthologous to human RPS3A (ribosomal protein S3A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps3a

Retroname Coord Strand Genomic Region ENSG
Rps3aP1 chr1:157520431-157520821 - Intergenic
N/A UCSC
Rps3aP2 chr1:27959718-27959891 - Intragenic
N/A UCSC
Rps3aP3 chr3:124001196-124002074 - Intergenic
N/A UCSC
Rps3aP4 chr6:91688842-91689068 - Intergenic
N/A UCSC
Rps3aP5 chr7:91635550-91636162 - Intergenic
N/A UCSC
Rps3aP6 chr8:62261592-62262729 + Intragenic
N/A UCSC
Rps3aP7 chr10:641637-642500 + Intragenic
Intragenic
N/A UCSC
Rps3aP8 chr11:79547698-79548561 + Intragenic
N/A UCSC
Rps3aP9 chr13:2191493-2192228 + Intergenic
N/A UCSC
Rps3aP10 chr13:93720671-93721524 + Intragenic
N/A UCSC
Rps3aP11 chr14:12720508-12721306 - Intragenic
N/A UCSC
Rps3aP12 chr14:67305825-67306266 + Intergenic
N/A UCSC
Rps3aP13 chr16:29512876-29513255 - Intergenic
N/A UCSC
Rps3aP14 chr17:25682214-25682576 - Intergenic
N/A UCSC
Rps3aP15 chr19:19286822-19287649 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_017153.1
CCTTTTGGCTCTCAGAGCGGCACCATGGCGGTCGGGAAGAACAAGCGCCTGACGAAAGGTGGCAAGAAGGGAGCCAAGAAGAAAGTGGTTGATCCATTTTCTAAGAAAGACTGGTATGATGTGAAAGCTCCAGCAATGTTCAATATTAGGAACATCGGGAAAACACTAGTTACAAGGACTCAAGGAACCAAAATTGCATCAGATGGCCTCAAGGGTCGTGTGTTCGAAGTGAGTCTTGCAGATCTACAGAACGATGAAGTTGCATTTAGAAAGTTCAAGCTAATTACTGAGGATGTTCAGGGCAAAAACTGTCTGACTAACTTCCATGGCATGGATCTTACCCGGGACAAAATGTGCTCCATGGTCAAAAAGTGGCAGACCATGATTGAAGCTCATGTTGATGTGAAGACGACCGATGGGTATTTGCTCCGACTTTTCTGTGTTGGTTTCACTAAGAAACGTAACAACCAGATTAGAAAGACATCCTATGCGCAGCACCAGCAGGTCCGCCAGATCCGCAAGAAGATGATGGAGATCATGACCCGAGAAGTGCAGACAAATGACTTGAAGGAAGTAGTTAATAAACTGATTCCAGACAGCATTGGGAAAGACATAGAGAAGGCTTGCCAGTCCATCTATCCTCTCCATGACGTTTTTGTTAGGAAAGTCAAAATGCTGAAGAAACCCAAGTTTGAATTGGGAAAACTCATGGAGCTCCATGGTGAAGGCGGTAGTTCTGGCAAAACAACTGGTGATGAGACAGGTGCTAAGGTTGAACGAGCTGATGGCTATGAACCACCAGTCCAAGAATCCGTTTAAAATCCAGATTTTTAATAGCGACAAATAAAAAGTCCTATTTGTGA