Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Stmn1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name stathmin 1
Also known as Lap18|OP18|PP17|PP19|PR22|SMN|prosolin
Coordinate chr5:152680412-152686807
Strand +
Gene summary Predicted to enable tubulin binding activity. Involved in brain development. Predicted to be located in cytosol and membrane. Predicted to be active in cytoplasm and neuron projection. Orthologous to human STMN1 (stathmin 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Stmn1

Retroname Coord Strand Genomic Region ENSG
Stmn1P2 chr2:132194919-132195630 + Intergenic
 N/A UCSC
Stmn1P6 chr10:67250673-67251195 + Intergenic
 N/A UCSC
Stmn1P1 chr2:12213421-12214359 - Intergenic
 N/A UCSC
Stmn1P3 chr3:172816160-172817143 + Intergenic
 N/A UCSC
Stmn1P4 chr4:37945322-37946181 - Intergenic
 N/A UCSC
Stmn1P5 chr8:94041561-94042533 - Intragenic
 N/A UCSC
Stmn1P7 chr10:83147154-83147969 - Intergenic
 N/A UCSC
Stmn1P8 chrX:118359795-118360146 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_017166.1
GCTTGGCTTAGGCGGAGGCGACGGCAGGGTAGGGAGCAGCCGGGAACGCGGCGAGCCCCTAGCCGGGGACACGGGACGGGCGGAGACCTCGAGCCCTGGGCTTTCCTTGCCAGTGGATTGTGTAGAGTGTACAGCCAGTCTCTTGTCTTCTGTCCAACATGGCATCTTCTGATATTCAGGTGAAAGAGCTGGAGAAGCGTGCTTCCGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCGATCAAAAGAATCTGTCCCCGAGTTCCCCCTTTCCCCCCCAAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAATTAGAAGCTGCAGAAGAAAGACGCAAGTCTCATGAAGCAGAAGTCTTGAAGCAGCTCGCTGAGAAGCGGGAGCATGAAAAAGAAGTGCTCCAGAAAGCCATTGAGGAGAACAACAACTTCAGCAAAATGGCAGAGGAGAAACTGACCCACAAAATGGAGGCTAACAAAGAGAACCGGGAGGCGCAAATGGCTGCCAAGCTGGAGCGTTTGCGAGAGAAGGACAAGCACGTTGAAGAGGTGCGGAAGAACAAAGAATCCAAAGACCCCGCGGACGAGACCGAGGCTGACTAAGTTGTTCCGAGAACTGACTTTCTCCCCGACCCCTTCCTAAATATCCAAAGACTGTACTGGCCAGTGTCATTTACTTTTTCCCTCCTGACAAATATTCTAGAAGCTGATGTAGGACCGTATAGGTAGATCCAGACCGTGAGATGTTTTAGGGGCTCAAGGGGAGAAACTGAAAGTGTTTTGCTCTTTTTTAAAGTGTTGGTCTTTCTAACGTAGCTATTTTTCTCGTTGCATCTTTTCCTCTCGGGCACACTCGGTGTGCTGGGTTAATGGCTAGTGCTGTATTGACTGTGGAAGACGTTCGTGAAGAGTATGTAGTGGCTTCTTCCAACCCATTAGATGCTGAGTATCTGTTCACTTTGCGATCCCAATTCTGTCCCAATCTCACCAGATGCTACTGTACTTGAATGGTTAATAAACTGCACAGTGCTGTTGGTC
>XM_006239123.3
AATGCGGTGCGCCTGGTCCGGGTCACGTGCCGCTGTTTGGCGCTTTTGTGCGCGCCCAGGTCTGTTGGTTCTCAGAGTGTGGCCAGGCGGCTCGGACTGAGCAGGGCTTTCCTTGCCAGTGGATTGTGTAGAGTGTACAGCCAGTCTCTTGTCTTCTGTCCAACATGGCATCTTCTGATATTCAGGTGAAAGAGCTGGAGAAGCGTGCTTCCGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCGATCAAAAGAATCTGTCCCCGAGTTCCCCCTTTCCCCCCCAAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAATTAGAAGCTGCAGAAGAAAGACGCAAGTCTCATGAAGCAGAAGTCTTGAAGCAGCTCGCTGAGAAGCGGGAGCATGAAAAAGAAGTGCTCCAGAAAGCCATTGAGGAGAACAACAACTTCAGCAAAATGGCAGAGGAGAAACTGACCCACAAAATGGAGGCTAACAAAGAGAACCGGGAGGCGCAAATGGCTGCCAAGCTGGAGCGTTTGCGAGAGAAGGACAAGCACGTTGAAGAGGTGCGGAAGAACAAAGAATCCAAAGACCCCGCGGACGAGACCGAGGCTGACTAAGTTGTTCCGAGAACTGACTTTCTCCCCGACCCCTTCCTAAATATCCAAAGACTGTACTGGCCAGTGTCATTTACTTTTTCCCTCCTGACAAATATTCTAGAAGCTGATGTAGGACCGTATAGGTAGATCCAGACCGTGAGATGTTTTAGGGGCTCAAGGGGAGAAACTGAAAGTGTTTTGCTCTTTTTTAAAGTGTTGGTCTTTCTAACGTAGCTATTTTTCTCGTTGCATCTTTTCCTCTCGGGCACACTCGGTGTGCTGGGTTAATGGCTAGTGCTGTATTGACTGTGGAAGACGTTCGTGAAGAGTATGTAGTGGCTTCTTCCAACCCATTAGATGCTGAGTATCTGTTCACTTTGCGATCCCAATTCTGTCCCAATCTCACCAGATGCTACTGTACTTGAATGGTTAATAAACTGCACAGTGCTGTTGGTC