Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tufm
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name Tu translation elongation factor, mitochondrial
Also known as -
Coordinate chr1:197903582-197907189
Strand +
Gene summary Predicted to enable translation elongation factor activity. Involved in response to ethanol. Located in mitochondrion. Is active in synapse. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 4. Orthologous to human TUFM (Tu translation elongation factor, mitochondrial). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tufm

Retroname Coord Strand Genomic Region ENSG
TufmP2 chr16:60013443-60013726 + Intragenic
 N/A UCSC
TufmP1 chr15:6139074-6140617 - Intergenic
 N/A UCSC
TufmP3 chr17:44632443-44632747 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001106295.1
CAAACTAACCCTAAGCCCGCTGCCCTGAAAACTACAACACCCATAAGCCTTCGGGAGCGCTCGTGCATTGTGGGGCGCTCCGCATTTTCCTCCTAAAGTGGCCCCTCAGGTTGAACTGTGAAAATTCTCCATCATCCCCCGCGAGACACCAGAAACCTCCTTTTCCGCTCCATGCCCGGATATAAGTGGCCGTGGCCATAGAAACTTTCTGCTAGAGGCTCCCAAAGTCGCTGTCCCGACCCTCATTTCCGCCGGAAGTGATCTGCTGTTCCAAGTGCCCGTCCTTCCCTACACGCGCGGGCTCCGGGTCCCTAGTTCTCGGTCCCGGTCGCCGAGTACTACCACAATGGCGGCAGCGACTCTATTACGAGCGACGCCCCGTTTCAGCGGTCTCTGCGCCAGCCCAACCCCATTTCTGCAAGGTCGGCTGCGGCCGCTGAAGGCCCCGGCATCGCCCTTCTTGTGTCGCGGCCTAGCAGTGGAGGCCAAGAAGACTTACGTACGCGACAAACCCCATGTGAATGTGGGTACCATCGGGCATGTGGACCATGGCAAGACCACCCTGACCGCAGCCATCACGAAAATTCTAGCCGAGGGAGGTGGAGCTAAGTTCAAGAAGTACGAGGAGATAGACAATGCCCCAGAGGAGCGAGCTCGGGGTATCACCATCAATGCAGCTCATGTGGAGTATAGCACTGCTGCCCGACACTATGCCCACACAGACTGCCCTGGTCATGCAGATTATGTTAAGAATATGATCACAGGCACCGCCCCTCTGGATGGCTGCATCCTGGTGGTGGCAGCTAATGATGGCCCCATGCCCCAGACCCGAGAGCACTTACTGCTAGCTAAGCAGATTGGGGTAGAGCATGTTGTGGTGTATGTGAACAAGGCAGATGCTGTCCAGGACTCGGAGATGGTGGAGCTGGTAGAGCTGGAGATCCGGGAGCTGCTCACTGAGTTTGGCTATAAAGGAGAGGAAACCCCAGTCATCGTAGGCTCGGCCCTCTGTGCTCTTGAGCAACGTGATCCTGAGCTAGGTGTGAAGTCAGTGCAGAAGCTTCTGGATGCTGTGGACACTTACATCCCAGTACCCACCCGGGACCTGGAGAAGCCCTTTCTGCTCCCTGTAGAGTCAGTTTACTCTATTCCTGGCCGCGGCACAGTGGTGACAGGTACACTAGAACGTGGCATTTTGAAGAAAGGAGATGAGTGTGAGTTGCTGGGACATAACAAGAACATTCGCACTGTGGTGACAGGCATTGAGATGTTCCACAAGAGCCTGGAGAGGGCTGAGGCAGGGGATAACCTTGGTGCTCTGGTCCGAGGCTTAAAGCGAGAGGATTTGAGGCGTGGTTTGGTCATGGTCAAGCCAGGATCCATCCAACCCCACCAGAAGGTGGAGGCCCAGGTTTATATCCTCAGCAAGGAGGAGGGTGGCCGCCACAAACCCTTTGTATCTCATTTCATGCCCGTCATGTTCTCCCTGACCTGGGACATGGCCTGTCGAGTCATCTTGCCTCCAGGGAAGGAACTTGCCATGCCTGGAGAGGACTTGAAGCTTAGCCTAATCTTGCGGCAGCCCATGATCTTAGAGAAAGGCCAACGTTTCACTTTGAGGGATGGCAACAAGACCATTGGCACAGGCCTTGTCACTGATGTACCAGCCATGACCGAGGAGGACAAGAACATCAAATGGAGCTGAGTCTGGACTTCTGCTCAGGTTGTTGAGCTTAAAGCTGCCCTGGTCAGCATTCCCACTTGTGGACACAAGCTGCATCCAACCAGAGTACACCTATGGACATTTCTAATCCTGCTCACAAGGAGTGAGTGGCCCGCCAAGAGAGGTTGGCAAATAAAACTGTTCCGTGAATAATGCAGCCT
>XM_006230224.1
TAACCCTAAGCCCGCTGCCCTGAAAACTACAACACCCATAAGCCTTCGGGAGCGCTCGTGCATTGTGGGGCGCTCCGCATTTTCCTCCTAAAGTGGCCCCTCAGGTTGAACTGTGAAAATTCTCCATCATCCCCCGCGAGACACCAGAAACCTCCTTTTCCGCTCCATGCCCGGATATAAGTGGCCGTGGCCATAGAAACTTTCTGCTAGAGGCTCCCAAAGTCGCTGTCCCGACCCTCATTTCCGCCGGAAGTGATCTGCTGTTCCAAGTGCCCGTCCTTCCCTACACGCGCGGGCTCCGGGTCCCTAGTTCTCGGTCCCGGTCGCCGAGTACTACCACAATGGCGGCAGCGACTCTATTACGAGCGACGCCCCGTTTCAGCGGTCTCTGCGCCAGCCCAACCCCATTTCTGCAAGGTCGGCTGCGGCCGCTGAAGGCCCCGGCATCGCCCTTCTTGTGTCGCGGCCTAGCAGTGGAGGCCAAGAAGACTTACGTACGCGACAAACCCCATGTGAATGTGGGTACCATCGGGCATGTGGACCATGGCAAGACCACCCTGACCGCAGCCATCACGAAAATTCTAGCCGAGGGAGGTGGAGCTAAGTTCAAGAAGTACGAGGAGATAGACAATGCCCCAGAGGAGCGAGCTCGGGGTATCACCATCAATGCAGCTCATGTGGAGTATAGCACTGCTGCCCGACACTATGCCCACACAGACTGCCCTGGTCATGCAGATTATGTTAAGAATATGATCACAGGCACCGCCCCTCTGGATGGCTGCATCCTGGTGGTGGCAGCTAATGATGGCCCCATGCCCCAGACCCGAGAGCACTTACTGCTAGCTAAGCAGATTGGGGTAGAGCATGTTGTGGTGTATGTGAACAAGGCAGATGCTGTCCAGGACTCGGAGATGGTGGAGCTGGTAGAGCTGGAGATCCGGGAGCTGCTCACTGAGTTTGGCTATAAAGGAGAGGAAACCCCAGTCATCGTAGGCTCGGCCCTCTGTGCTCTTGAGCAACGTGATCCTGAGCTAGGTGTGAAGTCAGTGCAGAAGCTTCTGGATGCTGTGGACACTTACATCCCAGTACCCACCCGGGACCTGGAGAAGCCCTTTCTGCTCCCTGTAGAGTCAGTTTACTCTATTCCTGGCCGCGGCACAGTGGTGACAGGCATTGAGATGTTCCACAAGAGCCTGGAGAGGGCTGAGGCAGGGGATAACCTTGGTGCTCTGGTCCGAGGCTTAAAGCGAGAGGATTTGAGGCGTGGTTTGGTCATGGTCAAGCCAGGATCCATCCAACCCCACCAGAAGGTGGAGGCCCAGGTTTATATCCTCAGCAAGGAGGAGGGTGGCCGCCACAAACCCTTTGTATCTCATTTCATGCCCGTCATGTTCTCCCTGACCTGGGACATGGCCTGTCGAGTCATCTTGCCTCCAGGGAAGGAACTTGCCATGCCTGGAGAGGACTTGAAGCTTAGCCTAATCTTGCGGCAGCCCATGATCTTAGAGAAAGGCCAACGTTTCACTTTGAGGGATGGCAACAAGACCATTGGCACAGGCCTTGTCACTGATGTACCAGCCATGACCGAGGAGGACAAGAACATCAAATGGAGCTGAGTCTGGACTTCTGCTCAGGTTGTTGAGCTTAAAGCTGCCCTGGTCAGCATTCCCACTTGTGGACACAAGCTGCATCCAACCAGAGTACACCTATGGACATTTCTAATCCTGCTCACAAGGAGTGAGTGGCCCGCCAAGAGAGGTTGGCAAATAAAACTGTTCCGTGAATAATGCA
>XM_006230225.1
TAACCCTAAGCCCGCTGCCCTGAAAACTACAACACCCATAAGCCTTCGGGAGCGCTCGTGCATTGTGGGGCGCTCCGCATTTTCCTCCTAAAGTGGCCCCTCAGGTTGAACTGTGAAAATTCTCCATCATCCCCCGCGAGACACCAGAAACCTCCTTTTCCGCTCCATGCCCGGATATAAGTGGCCGTGGCCATAGAAACTTTCTGCTAGAGGCTCCCAAAGTCGCTGTCCCGACCCTCATTTCCGCCGGAAGTGATCTGCTGTTCCAAGTGCCCGTCCTTCCCTACACGCGCGGGCTCCGGGTCCCTAGTTCTCGGTCCCGGTCGCCGAGTACTACCACAATGGCGGCAGCGACTCTATTACGAGCGACGCCCCGTTTCAGCGGTCTCTGCGCCAGCCCAACCCCATTTCTGCAAGGTCGGCTGCGGCCGCTGAAGGCCCCGGCATCGCCCTTCTTGTGTCGCGGCCTAGCAGTGGAGGCCAAGAAGACTTACGTACGCGACAAACCCCATGTGAATGTGGGTACCATCGGGCATGTGGACCATGGCAAGACCACCCTGACCGCAGCCATCACGAAAATTCTAGCCGAGGGAGGTGGAGCTAAGTTCAAGAAGTACGAGGAGATAGACAATGCCCCAGAGGAGCGAGCTCGGGGTATCACCATCAATGCAGCTCATGTGGAGTATAGCACTGCTGCCCGACACTATGCCCACACAGACTGCCCTGGTCATGCAGATTATGTTAAGAATATGATCACAGGCACCGCCCCTCTGGATGGCTGCATCCTGGTGGTGGCAGCTAATGATGGCCCCATGCCCCAGACCCGAGAGCACTTACTGCTAGCTAAGCAGATTGGGGTAGAGCATGTTGTGGTGTATGTGAACAAGGCAGATGCTGTCCAGGACTCGGAGATGGTGGAGCTGGTAGAGCTGGAGATCCGGGAGCTGCTCACTGAGTTTGGCTATAAAGGAGAGGAAACCCCAGTCATCGTAGGCTCGGCCCTCTGTGCTCTTGAGCAACGTGATCCTGAGCTAGGTGTGAAGTCAGTGCAGAAGCTTCTGGATGCTGTGGACACTTACATCCCAGTACCCACCCGGGACCTGGAGAAGCCCTTTCTGCTCCCTGTAGAGTCAGTTTACTCTATTCCTGGCCGCGGCACAGTGGTGACAGGTACACTAGAACGTGGCATTTTGAAGAAAGGAGATGAGTGTGAGTTGCTGGGACATAACAAGAACATTCGCACTGTGGTGACAGGCATTGAGATGTTCCACAAGAGCCTGGAGAGGGCTGAGGCAGGGGATAACCTTGGTGCTCTGGTCCGAGGCTTAAAGCGAGAGGATTTGAGGCGTGGTTTGGTCATGGTCAAGCCAGGATCCATCCAACCCCACCAGAAGGTGGAGGCCCAGGAACTTGCCATGCCTGGAGAGGACTTGAAGCTTAGCCTAATCTTGCGGCAGCCCATGATCTTAGAGAAAGGCCAACGTTTCACTTTGAGGGATGGCAACAAGACCATTGGCACAGGCCTTGTCACTGATGTACCAGCCATGACCGAGGAGGACAAGAACATCAAATGGAGCTGAGTCTGGACTTCTGCTCAGGTTGTTGAGCTTAAAGCTGCCCTGGTCAGCATTCCCACTTGTGGACACAAGCTGCATCCAACCAGAGTACACCTATGGACATTTCTAATCCTGCTCACAAGGAGTGAGTGGCCCGCCAAGAGAGGTTGGCAAATAAAACTGTTCCGTGAATAATGCA