Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Trmt112
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name tRNA methyltransferase activator subunit 11-2
Also known as RGD1309710
Coordinate chr1:222167927-222168780
Strand +
Gene summary Predicted to enable protein heterodimerization activity and protein methyltransferase activity. Predicted to be involved in macromolecule methylation and positive regulation of rRNA processing. Predicted to be located in nucleoplasm and perinuclear region of cytoplasm. Predicted to be part of protein-containing complex. Orthologous to human TRMT112 (tRNA methyltransferase activator subunit 11-2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Trmt112

Retroname Coord Strand Genomic Region ENSG
Trmt112P1 chr15:34401509-34401938 + Intergenic
N/A UCSC
Trmt112P2 chr18:1816724-1816902 + Intragenic
N/A UCSC
Trmt112P3 chr18:64027810-64028324 - Intragenic
N/A UCSC
Trmt112P4 chrX:11396240-11396628 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001106330.2
CGGCCTCCGGAGCTCCGGTGCGACAACATGAAACTGCTCACCCACAATCTCCTCAGCTCGCATGTGCGGGGCGTGGGCACGCGTGGCTTCCCGCTGCGCCTGCAGGCCACCGAGGTCCGCATCAACCCTGTGGAGTTCAACCCCGACTTCGTGGCGCGGATGATCCCCAAAGTGGAGTGGGCGGCGCTTGTGCAGGCAGCGGACACCTTAAACTTGGCCGAGGTACCCAAAGAGCCGACTGAAGGCTATGAGCACGATGAGACGTTTTTGAGGAAGATGCACCATGTGTTGCTTGAGGTTGATGTGCTGGAGGGCACCCTGCAATGCCCAGAATCTGGTCGTCTTTTCCCCATCAGCCGCGGGATCCCCAATATGCTGTTGAATGATGAGGAAACCGAGACGTAACCTTGTTAGCCACATCTTTGGTGTTTCGTGACTGTGTGTGTTATCTGTTGTATGGTCTGTTAACTAGATGTGTCGTGCGTGACCCCCCAAATTCCCCCAATGATTCACCAACCACCGTGTACTTGAGCTCCATAGTATATTTTTTTTCTCATTAAAGGTTCAAAACCAAAA