Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hmgb2
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name high mobility group box 2
Also known as Hmg2
Coordinate chr16:36077615-36080191
Strand -
Gene summary Enables lipid binding activity and nucleosomal histone binding activity. Involved in animal organ regeneration; nervous system development; and positive regulation of nucleobase-containing compound metabolic process. Located in nucleus. Orthologous to human HMGB2 (high mobility group box 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgb2

Retroname Coord Strand Genomic Region ENSG
Hmgb2P1 chr1:20416639-20417727 - Intergenic
N/A UCSC
Hmgb2P3 chr2:198000846-198002011 - Intergenic
N/A UCSC
Hmgb2P4 chr3:125309552-125310539 + Intergenic
N/A UCSC
Hmgb2P5 chr4:121658554-121659716 + Intergenic
N/A UCSC
Hmgb2P6 chr5:91667340-91667832 - Intergenic
N/A UCSC
Hmgb2P7 chr6:22528477-22529583 - Intergenic
N/A UCSC
Hmgb2P8 chr9:54211278-54211906 + Intergenic
N/A UCSC
Hmgb2P9 chr10:93098177-93098415 + Intragenic
N/A UCSC
Hmgb2P10 chr11:22014002-22014593 + Intergenic
N/A UCSC
Hmgb2P11 chr11:48111233-48111789 - Intergenic
N/A UCSC
Hmgb2P12 chr11:49708037-49709129 - Intergenic
N/A UCSC
Hmgb2P14 chr14:73674666-73675742 + Intergenic
N/A UCSC
Hmgb2P15 chr16:23984564-23985554 + Intragenic
Intragenic
N/A UCSC
Hmgb2P16 chr16:54304857-54305518 + Intragenic
N/A UCSC
Hmgb2P17 chr20:33174573-33174878 - Intragenic
N/A UCSC
Hmgb2P2 chr2:106892743-106893349 + Intergenic
N/A UCSC
Hmgb2P13 chr13:41701452-41702161 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_017187.2
CGTCAAGTTGCCGTGGCGCGGAGAACTCTGCAAAACAAGAGGCTGGGGATTGCGTTAGTGATAAGCCAGTTCTCGCCGGAGCTTGGGGAAGGAAGTCTCTCTGTGGAGGTCTGAGGGAAGAGCTCGCGCCAGGTAGACGCTGCGCCGTCATCATGGGCAAGGGGGACCCCAACAAGCCGCGGGGCAAGATGTCCTCGTACGCCTTCTTCGTGCAGACCTGCCGGGAGGAGCACAAGAAGAAGCATCCCGACTCGTCGGTCAACTTCGCCGAGTTCTCGAAGAAATGTTCGGAGAGATGGAAGACCATGTCTGCCAAGGAAAAGTCGAAGTTTGAGGATTTGGCCAAGAGCGACAAAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGTGATAAGAAAGGAAAGAAAAAAGATCCAAATGCTCCCAAGAGACCACCGTCTGCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCCGGCCTGTCTATTGGAGATACTGCAAAGAAACTGGGGGAGATGTGGTCTGAGCAATCTGCCAAAGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGTAGGAAAGAAGGGTCCTGGTAGGCCAACAGGCTCAaagaagaagaatgaaccagaagatgaggaagaggaggaggaggaggaagatgatgaagatgaagaggaggaagatgaggatgaagaataagTATCTGTCCTAAAGTGTGGAGTATATGTGCTCAGGCAATTATTTTGCTAAGAATGTGAAATTCAAGTGCAGCTCAACATTAGCTTCAGTATAAAAACTGTACAGATTTTTGTATAGCTGATGAGATTCTTTGTAGAGAAAATACTTTTTAAAAAGGGTTTGTAGCTTTTTCAGGGGCTACAACGTACAGTTAGATTTAAAGCTTTTGATGTTGAATGTTTCTAAATATTTAATGGTTTCTTTAATTTCTTATGATAGCAAAAAAAAAACTTCATAGGAATTTGTATTACCAGTAAAAGATTTTTTTTTTTAGGATGTTGCATTTTTGTTTTTTTTAAATTTGTAATAAAATAATGTATATTACTTG
>XM_017600052.1
AGTTGCCGTGGCGCGGAGAACTCTGCAAAACAAGAGGCTGGGGATTGCGTTAGTGATAAGCCAGTTCTCGCCGGAGCTTGGGGAAGGAAGTCTCTCTGTGGAGGTCTGAGGGAAGAGCTCGCGCCAGGTAAGACTCGGCCGAGAGTCTCGGGGCTTGGCGGCCCGGCTCTTTCCGCGTAGACTGGGACGTGTGTCGGGCTTCCGCACGGCCGCTTCGGGGGCCTTAGAAGGCGGGCGGAATTTGAGGTAGACGCTGCGCCGTCATCATGGGCAAGGGGGACCCCAACAAGCCGCGGGGCAAGATGTCCTCGTACGCCTTCTTCGTGCAGACCTGCCGGGAGGAGCACAAGAAGAAGCATCCCGACTCGTCGGTCAACTTCGCCGAGTTCTCGAAGAAATGTTCGGAGAGATGGAAGACCATGTCTGCCAAGGAAAAGTCGAAGTTTGAGGATTTGGCCAAGAGCGACAAAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGTGATAAGAAAGGAAAGAAAAAAGATCCAAATGCTCCCAAGAGACCACCGTCTGCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCCGGCCTGTCTATTGGAGATACTGCAAAGAAACTGGGGGAGATGTGGTCTGAGCAATCTGCCAAAGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGTAGGAAAGAAGGGTCCTGGTAGGCCAACAGGCTCAaagaagaagaatgaaccagaagatgaggaagaggaggaggaggaggaagatgatgaagatgaagaggaggaagatgaggatgaagaataagTATCTGTCCTAAAGTGTGGAGTATATGTGCTCAGGCAATTATTTTGCTAAGAATGTGAAATTCAAGTGCAGCTCAACATTAGCTTCAGTATAAAAACTGTACAGATTTTTGTATAGCTGATGAGATTCTTTGTAGAGAAAATACTTTTTAAAAAGGGTTTGTAGCTTTTTCAGGGGCTACAACGTACAGTTAGATTTAAAGCTTTTGATGTTGAATGTTTCTAAATATTTAATGGTTTCTTTAATTTCTTATGATAGCAAAAAAAAAACTTCATAGGAATTTGTATTACCAGTAAAAGATTTTTTTTTTTAGGATGTTGCATTTTTGTTTTTTTTAAATTTGTAATAAAATAATGTATATTACTTGCA