Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps18
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S18
Also known as Ke3
Coordinate chr20:5441875-5445553
Strand +
Gene summary Enables protein kinase binding activity. Predicted to be involved in translation. Part of cytosolic small ribosomal subunit. Orthologous to human RPS18 (ribosomal protein S18). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps18

Retroname Coord Strand Genomic Region ENSG
Rps18P1 chr1:183677167-183677702 - Intergenic
N/A UCSC
Rps18P2 chr2:122732248-122732791 + Intragenic
N/A UCSC
Rps18P3 chr5:116973180-116973655 + Intergenic
N/A UCSC
Rps18P4 chr5:117509312-117509853 + Intergenic
N/A UCSC
Rps18P5 chr5:152933022-152933495 - Intergenic
N/A UCSC
Rps18P6 chr5:166444796-166445022 + Intergenic
N/A UCSC
Rps18P7 chr5:22024361-22024715 + Intergenic
N/A UCSC
Rps18P8 chr5:35748889-35749420 + Intergenic
N/A UCSC
Rps18P9 chr5:72321012-72321498 - Intergenic
N/A UCSC
Rps18P10 chr5:89971471-89972006 + Intergenic
N/A UCSC
Rps18P11 chr6:133404244-133404910 + Intergenic
N/A UCSC
Rps18P12 chr6:21626807-21627131 + Intergenic
N/A UCSC
Rps18P13 chr7:25612003-25612531 - Intergenic
N/A UCSC
Rps18P14 chr7:72599435-72599916 + Intergenic
N/A UCSC
Rps18P15 chr8:91020747-91020994 + Intergenic
N/A UCSC
Rps18P16 chr9:38389332-38389823 + Intergenic
N/A UCSC
Rps18P17 chr10:104521699-104522241 - Intergenic
N/A UCSC
Rps18P18 chr11:278171-278479 + Intergenic
N/A UCSC
Rps18P19 chr13:110326629-110327149 + Intergenic
N/A UCSC
Rps18P20 chr15:88692023-88692556 - Intergenic
N/A UCSC
Rps18P21 chr18:76010624-76011130 - Intergenic
N/A UCSC
Rps18P22 chr19:14093181-14093723 + Intergenic
N/A UCSC
Rps18P23 chr19:35399800-35400108 - Intergenic
N/A UCSC
Rps18P24 chr19:41456615-41456924 - Intergenic
N/A UCSC
Rps18P25 chrX:141316143-141316528 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_213557.1
CTCTCTTCCACAGGAGGCCTACACGCCGCCGCTTGTGCCGCCGCCATGTCCCTAGTGATCCCCGAGAAGTTTCAGCACATCCTGCGAGTACTCAACACCAACATCGATGGGCGGCGGAAAATAGCCTTCGCTATCACTGCCATTAAGGGTGTGGGGCGGAGATACGCTCATGTGGTGTTGAGGAAAGCAGACATTGACCTCACCAAGAGGGCTGGGGAGCTCACGGAGGACGAGGTGGAGCGTGTGATCACCATCATGCAGAACCCACGACAATACAAGATCCCTGACTGGTTCTTGAACAGACAGAAGGACGTGAAGGATGGGAAGTATAGCCAGGTTCTGGCCAACGGTCTAGACAACAAGCTGCGTGAGGACCTGGAGCGGCTGAAGAAAATCCGAGCCCATAGAGGGCTGCGCCACTTTTGGGGCCTTCGTGTCCGGGGTCAGCACACCAAGACCACTGGCCGCAGGGGCCGTACTGTGGGTGTGTCCAAGAAGAAATGAGTCTTTGGGCCTTTGCTGTTAATAAATAGTTTATATACCAATGA