Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pou5f1
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name POU class 5 homeobox 1
Also known as -
Coordinate chr20:3747231-3751994
Strand -
Gene summary Enables DNA-binding transcription activator activity, RNA polymerase II-specific; protein domain specific binding activity; and sequence-specific DNA binding activity. Involved in regulation of transcription, DNA-templated and response to cytokine. Located in nucleus. Human ortholog(s) of this gene implicated in embryonal carcinoma and seminoma. Orthologous to several human genes including POU5F1 (POU class 5 homeobox 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pou5f1

Retroname Coord Strand Genomic Region ENSG
Pou5f1P1 chr2:5437476-5437650 + Intergenic
 N/A UCSC
Pou5f1P2 chr5:161374436-161375338 + Intragenic
 N/A UCSC
Pou5f1P3 chr13:56892457-56893766 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001009178.2
GGGGAGGGAGAGAGGTGCAAACAGTCCCTAGGTGAGTCGTCCTTCCACCAGGCCCCCGGCTCGGGGAGCCCACCTTCCCCATGGCTGGACACCTGGCTTCAGACTTCGCCTTCTCACCCCCACCTGGTGGGGGTGATGGGTCAGCAGGGCTGGAGCCGGGCTGGGTGGACCCTCGAACCTGGCTAAGCTTCCAGGGGCCTCCAAGTGGGCCTGGAATCGGACCAGGTTCAGAGGTGCTGGGGATCTCCCCGTGTCCCCCAGCATACGAGTTCTGTGGAGGGATGGCATACTGTGGACCTCAGGTTGGACTGGGCCTAGTCCCCCAAGTTGGCGTGGAGACTCTGCAGCCCGAGGGCCAGGCAGGAGCACGAGTGGAGAGCAACTCGGAGGGAGCCTCCTCTGGGCCCTGTACTGCCCGCCCCAGCGCCGTGAAGTTGGAGAAGGTGGAACCTAGTCCCGAGGAGTCCCAGGATATGAAAGCCCTGCAGAAGGAGCTAGAGCAGTTTGCCAAGCTGCTGAAACAGAAGAGGATCACCTTGGGGTACACCCAGGCCGACGTGGGGCTCACCCTGGGCGTTCTCTTTGGAAAGGTGTTCAGCCAGACAACCATCTGCCGCTTCGAGGCCCTGCAGCTCAGCCTTAAGAACATGTGTAAGCTGCGGCCCCTGCTGGAGAAGTGGGTGGAGGAAGCTGACAACAACGAGAACCTTCAGGAGATATGCAAATCGGAGACCCTGGTGCAGGCCCGGAAGAGAAAGCGGACTAGCATTGAGAACCGTGTGAGGTGGAACCTGGAGAACATGTTTCTGCAGTGCCCGAAGCCCTCCCTGCAGCAGATCACTAGCATTGCCAAGCAGCTTGGGCTGGAGAGGGATGTGGTTCGAGTGTGGTTCTGTAACCGGCGCCAGAAGGGGAAAAGATCGAGCATTGAATATTCCCAACGAGAAGAGTATGAGGCCGCGGGGAAACCTTTCCCAGGGGGGGCTGTGTCCTTTCCTCTGCCCCCAGGCCCCCACTTTGGTGCTCCAGGCTATGGGAGCCCCCATTTCACCACACTCTACTCGGTCCCTTTTCCTGAGGGCGAGGCCTTTCCCTCTGTTCCTGTCACTGCTCTGGGCTCTCCCATGCATTCAAACTGAGGCACCAGCCCTCCCTGGGGATGAGGTGAGCCAAGGCAAGGAAGGGAGGTAGACAAAGAGAACCTGAAGCTTTGGGGCCTAGATTCTTTTACTGGGGAGGAATTGAAAGCACAAACAGGGGTGGTTGGGGGGGCGGGGGGGGAGAGATGAAGTTCAGTGACGCTGTTGATCAGGAACCCGTCCGAAGTTCTTAAGTTCTTAAATAAAGTCTGGGATACACAGTA