Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ptp4a1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name protein tyrosine phosphatase 4A1
Also known as PRL-1
Coordinate chr9:37223363-37254222
Strand -
Gene summary Enables protein tyrosine phosphatase activity. Predicted to be involved in positive regulation of cell migration. Located in nucleus. Orthologous to human PTP4A1 (protein tyrosine phosphatase 4A1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ptp4a1

Retroname Coord Strand Genomic Region ENSG
Ptp4a1P1 chr1:153689609-153697840 + Intergenic
N/A UCSC
Ptp4a1P2 chr2:257076075-257078485 + Intergenic
N/A UCSC
Ptp4a1P3 chr6:23495452-23496574 - Intragenic
N/A UCSC
Ptp4a1P4 chr7:1546042-1546467 - Intragenic
N/A UCSC
Ptp4a1P5 chr9:65085320-65087544 + Intragenic
N/A UCSC
Ptp4a1P6 chr11:28667826-28670460 - Intergenic
N/A UCSC
Ptp4a1P7 chr13:72153342-72155743 - Intragenic
N/A UCSC
Ptp4a1P8 chr14:1370871-1371515 - Intergenic
N/A UCSC
Ptp4a1P9 chr16:354274-354699 - Intergenic
N/A UCSC
Ptp4a1P10 chrX:124141114-124148655 + Intergenic
N/A UCSC
Ptp4a1P11 chrX:45547596-45548720 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031579.3
CGCGCATTGGCTCTGGGCTGCGGCCGGCTCGGCGACGCTCCTCGGGCAGCTCACTGCATGGTCGTCTGGTGCccccgccgcctgcatcgccgccgccgccccgcgacgcccaccgccgcctgccctgccgccgccgcctgcgccgcCTCGGGATCGGCTGTATGATTAGGCCACAATCTTCAATGAGTAGACATATTCCTCAGTTCTGTGGTGTTCTCGGTCACACATTTATGGAGTTTCTGAAGGGCAGTGGAGACTACTGCCAGGCACAGCACGACCTCTATGCAGACAAGTGAACTGTAGAAATTCATTACTACTCCACCAAGAAGCCCCCATAAGAGTGGATAGCCTGGACACAGTCGTGTTGAATTGAAATCTGCAGAGCATTTTCCAAGAGCTCAGACCTGGATGGGGTAAACCTCAGTGCACTTCCTTTGTATCGCCTCAGTATTCCTGGATTGAAGAGTCACTGCTTCTTGTGAGGAGGTTCATTTCATTGCCCGTTTCTCCCGACTCATACTCAAAGCACTGAGAATTTCAAGTGGAGTATATTGAATATTGAAGTAGACTTCAggttgttttttggttttgttttggttttttgttttgttttgttttgttttgttttggttttcagtttttgtttGGAATCATTTCTGTATTCAATTTTTTAATTCTTTCATAACCCTATTGGGTGTTTTTTTAAACTAAATTAACATGGCTCGAATGAACCGCCCTGCTCCTGTGGAAGTCACATACAAGAACATGAGATTTCTTATTACACACAATCCAACCAATGCGACCTTAAACAAATTTATAGAGGAACTTAAGAAGTATGGAGTTACCACAATAGTAAGAGTATGCGAAGCAACTTACGACACTACTCTTGTGGAGAAAGAAGGCATTCATGTTCTTGACTGGCCTTTTGATGATGGTGCACCACCATCCAACCAGATTGTTGATGACTGGTTAAGTCTTGTGAAGATTAAGTTTCGTGAAGAACCTGGTTGCTGTATTGCTGTCCATTGTGTCGCAGGCCTTGGCAGAGCTCCGGTGCTTGTTGCCCTAGCATTAATTGAAGGTGGAATGAAATATGAAGATGCAGTACAATTCATAAGACAAAAGCGGCGCGGAGCTTTTAACAGCAAGCAACTTCTGTACCTGGAGAAGTACCGTCCTAAAATGCGGCTCCGCTTCAAGGATTCCAACGGTCATAGAAACAACTGTTGTATTCAATAAAACTGGGGTGCCTGATGCCATTGCCTTGGAAGAGGAACTTCAGATGGGACCTGATTTGTTATTTACCCAATGTGTCCACTTACCTGTGGAAGCTCCAGGGGAATATTGAAAAAGTTTTACCAGGCCACAAGCTTGACAGAATTGCAACCTCTATAATTGGGCTATGATCAACACGTTTGGACACTTAGCAAAAGATTTTTGCTGGTCAGCATTTAAAATGTGCTTATTATTTGTACCAATTGACCTTTCCTAAAATAAGGTATTGAGTAATGTCATTAAATGTACTCCTGTGCCAGAATATTATTAGTCTATAAGGAATTTAGAAGGATTAGGTGCCAAAATACCCAGCACAATACTTGTATATTTTTAGCATCATACAGAACCAAAATTCCAAGAACTAAGAACTCTCCAGACCTTCCATGGTGTATTCCTTCAGTCATTTCAAACACCGCAGGGCTTCTCTTGTTATCTGCCTGCTCACTCTATGTTTACATCTCCCACACTTACACCAGAACACATCAGGTTTGCTTAGCTATCTTTTAAGTCTTGCAATGATTATTTAATGTCTCTGTCTTATTTTGTGCTGTTTTGGGAAACCTCCATTTGAAAATCAACTTTGTTACAGAAGCACATATCTTCAATAATGTCTCCAGACAAAAAGCCTTATAGTTAATTTAATGTTTGCACTCGGGTGCAACCTGACAGGGAGGGCCTGAACAAGAAAGGAGAGGAGGCTATTAAATATTTTTAGTAATATGTTGCCTTTGTCTTGTGCAGAACATGTAGAGTATGCTCTTTAATTTAGTAAATATTTTTAAGACGTAGAGATACATTGTTGTAGCTAACCACTTAATCAAAATTTCTGAAATTCTTGTGTTTTCCATACCTATCTGAGGTTTTCCAACTTGTTTGAATTATGGTTTTCCCCTTCTCTTCCCAATCTCTTGCAAAAAAGTAAAAGTGGGATCTGCTAGTGAACTGAGCAGAAATATTTTATACGCCTTTTGAGCTATGTAACTTAATAATTGGATACTTGATCATTTGTTTTATTATGTAATCGATAAAATGGTGATGTGTATTAATGTTAGTTCAACCATATATTTATACTGTCTGGGAATGTGTGGTTATAGTTCTGTGGGAGAAATAGTTTGTCAGTGTTCACCAGCTTGTAAAAACTTAGTGCGAGAGCTTCAACATCTAAATAAATGATGAAACGCATTCGTCACTGAGGTCACTTTGCTTAAAATTAACTTAATTTGTAGAAAACAGTGGATTCAATTATTATCATTTCAGTTTATGGACAAATTTGTTAGGGTTACCAAGTGCGTTTAAAAATTGCTCTTTAAAGGTCTAGATAATTGTGAATCAATTGAATGTTGGGTACCAAGGGAAAACGGTTTGTAATAGTTGATGACCTTGATTTTTAATTCAATTCCACCAGTCACTTGTAGCTTTATGCAGTTTCCAATCCACTTTTCTCATTTTTAAGTTTATTACTTACCTGTATATATTTTGAAATTAATTTGAACCTGAGTATTTGGCACATGATGGCTTAATAAATTTTAACTTTCAATAATCTGAAA