Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ddit3
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name DNA-damage inducible transcript 3
Also known as CHOP|CHOP-10|Chop10|Gadd153|RM4
Coordinate chr7:70578564-70585074
Strand +
Gene summary Enables DNA-binding transcription factor activity and protein heterodimerization activity. Contributes to sequence-specific DNA binding activity. Involved in several processes, including cellular response to manganese ion; positive regulation of autophagy in response to ER overload; and regulation of transcription, DNA-templated. Located in cytoplasm and nucleus. Part of CHOP-C/EBP complex. Biomarker of several diseases, including borna disease; brain ischemia; chronic obstructive pulmonary disease; pulmonary venoocclusive disease; and ureteral obstruction. Human ortholog(s) of this gene implicated in myxoid liposarcoma. Orthologous to human DDIT3 (DNA damage inducible transcript 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ddit3

Retroname Coord Strand Genomic Region ENSG
Ddit3P1 chrX:81208669-81209320 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_024134.2
GGTCAGTATCTTGAGTCTAATACGTCGATCATACCATGTTGAAGATGAGCGGGTGGCAGCGACAGAGCCAAAATAACAGCCGGAACCTGAGGAGAGAGAAACCGGTCCAATTACAGTCATGGCAGCTGAGTCTCTGCCTTTCGCCTTTGAGACAGTGTCCAGCTGGGAGCTGGAAGCCTGGTATGAGGATCTGCAGGAGGTCCTGTCCTCAGATGAAATTGGGGGCACCTATATCTCATCCCCAGGAAACGAAGAGGAAGAATCAAAAACCTTCACTACTCTTGACCCTGCATCCCTAGCTTGGCTGACTGAGGAGCCAGGGCCAGCAGAGGTCACAAGCACCTCCCAAAGCCCTCGCTCTCCAGATTCCAGTCAGAGTTCTATGGCTCAGGAGGAAGAAGAGGAAGATCAAGGAAGAACTAGGAAACGGAAACAGAGTGGTCAGTGCGCAGCCCGGGCTGGGAAACAGCGCATgaaggagaaggagcaggagaatgagaggaaagTGGCACAGCTTGCTGAAGAGAACGAGCGGCTCAAGCAGGAAATCGAGCGCCTGACCAGGGAGGTAGAGACCACACGGCGGGCTCTGATCGACCGCATGGTCAGTCTGCACCAAGCATGAACTGTTGGCATCACCTCCTGTCTGTCTCTCCCGGAGTGTACCCAGCACCATCACGCCAGTGCCAAGCATGTAATCTCCAGTGCACATGCTGAGGAGGGGACTGAGGGTAGACCAAAGGAGAGGGGCTTGTACACTGTACATTCTTTATTACTGTCCATACCCAGTAAAGTGACTTTGTGTGAACATTC