Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rbm8a
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name RNA binding motif protein 8A
Also known as Rbm8
Coordinate chr2:198755261-198758028
Strand +
Gene summary Predicted to enable mRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; and regulation of alternative mRNA splicing, via spliceosome. Located in dendrite; neuronal cell body; and nucleus. Human ortholog(s) of this gene implicated in thrombocytopenia-absent radius syndrome. Orthologous to human RBM8A (RNA binding motif protein 8A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rbm8a

Retroname Coord Strand Genomic Region ENSG
Rbm8aP1 chr3:131269243-131269855 + Intergenic
 N/A UCSC
Rbm8aP2 chr19:39619525-39619875 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001271138.1
CCGAGGTTCCTAGCTACTAGACGCACAGAGAGCGCCGAGAGAAGCAAGATGGCGGACGTGCTGGATCTTCACGAGGCCGGGGGCGAGGATTTCGCCATGGATGAGGATGGTGACGAAAGCATCCACAAACTAAAAGAAAAAGCGAAGAAACGGAAGGGCCGCGGTTTTGGTTCTGAAGAGGGGTCCCGAGCGCGGATGCGGGAAGATTATGACAGTGTGGAGCAGGATGGCGATGAACCTGGACCACAGCGCTCTGTTGAAGGTTGGATTCTCTTTGTCACTGGAGTCCACGAAGAAGCCACTGAAGAAGATATCCATGACAAGTTCGCTGAATATGGGGAAATAAAAAATATCCACCTGAATTTGGACAGGCGCACGGGATACTTGAAGGGGTATACTCTAGTTGAGTATGAAACATACAAAGAAGCTCAGGCTGCCATGGAGGGACTAAATGGTCAAGATTTGATGGGACAGCCAATCAGTGTTGACTGGTGTTTTGTTCGTGGTCCACCAAAGGGCAAGAGGAGAGGTGGCCGAAGACGAAGCAGGAGTCCAGACCGAAGACGCCGATGAGATACTTAATAAATCCTCTGTTGACCAGGTGGTCTCCATGAGTCTATTTGGTTATGCTGCCTTGGATAAACAGGGCTAGGATGGACTTTGTGTTTATATTTAATTTCTTACCCTACTTGGTAATTTTGAGTTTAAGAAAAAAATAaatgtcattttgttttctacatttaaaactgtgtttgactgttctggaaattctaaacaacctcaGTGAGGCCTTCTGAGTGGTTGTGAAGCTACTTCTGTGTGGCGTGGCCTTCTGAGTTTCTAGAAAGGCTCACAGAGACTGCTCAGCATTTCTTTAGAGCATGAGAGTGAGCAGGTGTAATGGGTTTTTCTTGTGGTGTTCAGTGAATTTTACACTCTTGTGAGCAGATGCTATGTcagtgtcttgtgtagcccaggctggctttgaactcactgtattgtaaagaactttgattcttgcctcttacctcccaagtgctaacattgcacccatgggccatcatacccagtttatgtggtctccggaattaaaacatggagctctgagatgctcagccagctctacTTTGAATATGGTGCTAAACTGTGAAGTTTGTTAGTTCCTACAACATAAAAACCCAGCTTAAGTACTACTAGACCAATATgcacacctttaattccagcacttgggaggcaggtggatctcttgagttaggggcaacctggtctacacaagagttctaagacagccagggctacaaagaCATTGCTATTCCTTTATTATATATAGTTTTTAGCTGGGATGTTTTTTTAGGTGTGTCTGTTGTAACTGATTTGTTGTCTGTGTGGGTCCCTATGTGGCCCACACTGGCCTCAAACTGATGCTCCTATCTCTGTCTTCCCAATGCATAATGGCAAATATTAAACATAACTTTTTCTCAGTTGG